Gene Information

Name : ctrC (NMBNZ0533_0079)
Accession : YP_005902742.1
Strain : Neisseria meningitidis NZ-05/33
Genome accession: NC_017518
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein CtrC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 81338 - 82135 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTGTTGATGCGGGA
AATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATTCGTTATCG
TCTTGATGTGGAAATTTTTAAGGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCTATCCGATG
TTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCACCGCAATGT
AAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGATTATGGCGG
TATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGGCTTTTTTT
GCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACATTGACTTT
TGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATTAATGATTC
CGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTTGGTATATC
GTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCGCAATGA

Protein sequence : 
MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPM
LMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYI
VLCNLVLLLFGLAMVSKFSKGVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-115 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC YP_005902742.1 capsule polysaccharide export inner-membrane protein CtrC VFG0257 Protein 2e-115 100
ctrC YP_005902742.1 capsule polysaccharide export inner-membrane protein CtrC VFG0697 Protein 6e-85 71
ctrC YP_005902742.1 capsule polysaccharide export inner-membrane protein CtrC VFG0685 Protein 6e-85 71
ctrC YP_005902742.1 capsule polysaccharide export inner-membrane protein CtrC VFG2564 Protein 1e-44 45