Gene Information

Name : NMBM01240355_0085 (NMBM01240355_0085)
Accession : YP_005900779.1
Strain : Neisseria meningitidis M01-240355
Genome accession: NC_017517
Putative virulence/resistance : Virulence
Product : capsule polysaccharide modification protein LipB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 93988 - 95247 bp
Length : 1260 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAGACCGTCCTCCAAAACAACCTGCAAAACCTGCTCGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGTCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGAAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAATTTTTGCAA
GAATACATCGTTCAACATCACATCCAGGCGGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACATTAGAAAAAGACG
GCGTCAACGCATTTTCACCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCCAAACTGGCCCAGCAAGAATAT
GAAGCGCCAACGCCGGTACGCGGCGGGTTTATGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCGATGGACCGCGGTTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGCGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGCCTGATTCACAATAT
GCCTGTCAAAGTGCTCGGCCGTGCCCATTACGACATTCCCGGCATGACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCTAACAAAAACACATCCGACTCTTCCACACCAACAACCTAA

Protein sequence : 
MKQTVLQNNLQNLLESAENILLLQGPVGDFFLRLADWLTENGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYIVQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
EAPTPVRGGFMPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAHYDIPGMTDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKNTSDSSTPTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBM01240355_0085 YP_005900779.1 capsule polysaccharide modification protein LipB VFG0260 Protein 0.0 98
NMBM01240355_0085 YP_005900779.1 capsule polysaccharide modification protein LipB VFG0705 Protein 5e-108 56
NMBM01240355_0085 YP_005900779.1 capsule polysaccharide modification protein LipB VFG0693 Protein 5e-108 56