Gene Information

Name : NMBM01240355_0076 (NMBM01240355_0076)
Accession : YP_005900772.1
Strain : Neisseria meningitidis M01-240355
Genome accession: NC_017517
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein CtrD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 83965 - 84615 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTCAGTTGAACACGTTTCCAAACGCTATCTGACCCGCCAAGGTTGGCGGACAGTCTTGCACGATATTAGCTTCAA
AATGGAGAAGGGCGAGAAAATCGGTATTCTCGGCCGCAACGGTGCAGGTAAATCGACGCTCATCCGTTTGATCAGTGGCG
TTGAGCCGCCGACCACGGGTGAAATCAAGCGGACAATGAGTATTTCTTGGCCTTTGGCATTCTCCGGTGCGTTTCAAGGC
AGTCTGACCGGTATGGACAATTTGCGTTTCATCTGCCGGATTTACAATGTCGATATCGATTATGTGAAGAACTTTACCGA
AGAGTTTTCCGAGTTGGGGCAATATCTTTACGAGCCGGTCAAGCGTTATTCTTCAGGTATGAAGGCGCGTTTGGCATTTG
CTTTGTCGTTGGCGGTAGAGTTTGATTGCTATTTGATTGACGAAGTGATTGCAGTTGGTGACTCGCGTTTTGCCGATAAA
TGTAAGTACGAGTTGTTTGAAAAGCGCAAAGACCGTTCCATCATCTTGGTGTCGCACAGCCACAGCGCCATGAAGCAATA
TTGCGATAATGCGATGGTGCTGGAAAAAGGGCATATGTACCAGTTTGAAGATATGGACAAAGCCTACGAATATTATAATT
CGCTGCCTTAA

Protein sequence : 
MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGKSTLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNVDIDYVKNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-100 99
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 6e-44 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBM01240355_0076 YP_005900772.1 capsule polysaccharide export ATP-binding protein CtrD VFG0258 Protein 2e-100 99
NMBM01240355_0076 YP_005900772.1 capsule polysaccharide export ATP-binding protein CtrD VFG0696 Protein 9e-86 82
NMBM01240355_0076 YP_005900772.1 capsule polysaccharide export ATP-binding protein CtrD VFG2563 Protein 3e-63 59
NMBM01240355_0076 YP_005900772.1 capsule polysaccharide export ATP-binding protein CtrD VFG1449 Protein 2e-44 48