Gene Information

Name : NMBH4476_0074 (NMBH4476_0074)
Accession : YP_005898810.1
Strain : Neisseria meningitidis H44/76
Genome accession: NC_017516
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein CtrD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 83592 - 84242 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTCGGTTGAACATGTTTCCAAGCAGTATCAAATGCGCGGCGGTATGCGGACGGTGTTAGACGATATCAATTTTTC
GCTGCAAAAGGGTGAGAAAGTTGGTATTTTGGGTCGAAACGGTGCAGGTAAATCGACGCTCATCCGTTTGATTAGTGGTG
TCGAGCCGCCTACCTCGGGCGAAATCAAGCGAACCATGAGTATTTCTTGGCCGCTGGCGTTTTCTGGTGCCTTCCAAGGA
AGCCTGACCGGGATGGATAATCTGCGTTTTATCTGCCGGATTTATAATGTCGATATCGATTATGTGAAAGCGTTTACGGA
AGAATTTTCGGAGCTGGGGCAATATTTGTATGAGCCGGTGAAACGCTATTCTTCAGGTATGAAAGCGCGTTTGGCTTTTG
CGCTGTCGTTGGCGGTGGAGTTTGACTGTTACCTGATTGACGAAGTGATTGCAGTTGGTGACTCGCGTTTTGCCGATAAA
TGTAAGTACGAGTTGTTTGAAAAGCGCAAAGACCGTTCCATCATCTTGGTGTCGCACAGCCACAGCGCCATGAAGCAATA
TTGCGATAATGCGATGGTGCTGGAAAAAGGGCATATGTACCAGTTTGAAGATATGGACAAAGCCTACGAATATTATAATT
CGCTGCCTTAA

Protein sequence : 
MISVEHVSKQYQMRGGMRTVLDDINFSLQKGEKVGILGRNGAGKSTLIRLISGVEPPTSGEIKRTMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNVDIDYVKAFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 5e-95 95
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-44 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBH4476_0074 YP_005898810.1 capsule polysaccharide export ATP-binding protein CtrD VFG0258 Protein 2e-95 95
NMBH4476_0074 YP_005898810.1 capsule polysaccharide export ATP-binding protein CtrD VFG0696 Protein 5e-85 83
NMBH4476_0074 YP_005898810.1 capsule polysaccharide export ATP-binding protein CtrD VFG2563 Protein 5e-65 59
NMBH4476_0074 YP_005898810.1 capsule polysaccharide export ATP-binding protein CtrD VFG1449 Protein 1e-44 48