Gene Information

Name : NMBM04240196_0092 (NMBM04240196_0092)
Accession : YP_005896878.1
Strain : Neisseria meningitidis M04-240196
Genome accession: NC_017515
Putative virulence/resistance : Virulence
Product : capsule polysaccharide modification protein LipB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 99609 - 100868 bp
Length : 1260 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTCGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGTCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGAAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAATTTTTGCAA
GAATACATCGTTCAACATCACATCCAGGCTGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACATTAGAAAAAGACG
GCGTCAACGCATTTTCACCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCTATGGACCGCGGCTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGTGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGCATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCCAACAAAAAAACCTCCAACTCTTCCACACCAGTAATCTGA

Protein sequence : 
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTENGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYIVQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSNSSTPVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBM04240196_0092 YP_005896878.1 capsule polysaccharide modification protein LipB VFG0260 Protein 0.0 99
NMBM04240196_0092 YP_005896878.1 capsule polysaccharide modification protein LipB VFG0693 Protein 1e-108 55
NMBM04240196_0092 YP_005896878.1 capsule polysaccharide modification protein LipB VFG0705 Protein 1e-108 55