|
Name : NMBM04240196_0091 (NMBM04240196_0091) Accession : YP_005896877.1 Strain : Neisseria meningitidis M04-240196 Genome accession: NC_017515 Putative virulence/resistance : Virulence Product : capsule polysaccharide modification protein LipA Function : - COG functional category : - COG ID : - EC number : - Position : 97358 - 99472 bp Length : 2115 bp Strand : + Note : - DNA sequence : ATGTTCCTCTTTTCAGACGGCCTACAATCTATTAATAACAATAATCGACGAAAACGCATTGTGAAAAACGCCTACATCCC CTCTCGTGGCATCCGCAAAATCCCCCATCTCTTCACCCTATTGCCTGAGTTTCATATCTGCAAGGATGGGAAAGGAGCAG AGGCTGTTATCGGCTGGGGTTTGCGCCCGACGACACACAAAGCGCGTGCTTTTGCCGCTGAACACCAGCTTCCCTTTATT GCTTTGGAAGACGGCTTTTTACGCTCGCTTGGCCTAGGCGTTGCCGGCTATCCTCCCTATTCCATCGTCTATGACGACAT CGGCATCTACTACGACACCACACGTCCTTCGCGTTTGGAACAACTGATTCTTGCCGCCGATACCATGCCGTCTGAAACCT TGGCTCAGGCGCAACAGGCGATGGATTTCATCCTGCAACACCACCTGTCCAAATACAACCACGCGCCCGAACTTTCAGAC GATCATCCTTTACGCTCCCCATCCAAACCTGAAACCGTCCTCATTATCGACCAAACATTCGGCGATATGGCCATCCAATA TGGCGGCGCAGACGCCTCTACGTTTGAACTGATGTTTCAGACGGCCTTAAATGAAAACCCGCAAGCCGATATTTGGGTCA AAACCCATCCCGATGTTTTGTGCGGCAAAAAACAAGGCTATCTGACCCAGCTTGTGCAGCAACACCGCGTCCATCTTCTG GCAGAAGACATCAATCCGATTTCTTTGTTGCAAAACATCGATAAAGTTTATTGCGTTACCTCGCAAATGGGTTTTGAGGC GCTTTTGTGCGGCAAGCCGCTGACCACTTTCGGCCTGCCGTGGTATGCCGGATGGGGCGTGAGTGACGACCGCCATCCTA AAATCGACAGCCTTGTTCAAACCCAACGCCGCGCCCCCCGCAACTTGCTGCAGCTCTTCGCTGCAGCCTATCTGCAATAC AGCCGCTACCTCAACCCCAATACCGGCGAAGCAGGCAGCCTCTTTGATGTCATCGACTATCTGGCGACGGTCAAACGCAA AAACGACAAATTGCGTGGCGAGTTGTATTGCGTCGGTATGTCTTTGTGGAAACGCGCGGTTGCCAAACCGTTCTTTAACG TACCCTCTTGCCGTCTGAAATTTATCTCTTCCACCCAAAAACTGGCAGGGGTCAAACTGTCCGACGATGCACGCATCCTT GCCTGGGGCAACGGCAAAGAGGCCATCGTCCGCTTTGCCGAACAACACCACATCCCCCTGCTGCGCATGGAAGACGGCTT TATCCGATCGGTCGGACTCGGCTCTAATTTAGTACCGCCACTGTCACTTGTTACCGACGATATGGGCATTTATTTCAATG CCGAAGCCCCATCCCGTCTTGAACACATCCTGCAAAACCAAAACTTCGACGATCAAGACTTTCAGACGGCCTTGAAGCTG CAAAAAATGCTGACCGAAAACCACATCAGTAAATACAACGTCGGCAGCTCAGACTTCACCGCCCCGTCAACCGACAAAAC CGTGATCCTCGTTCCCGGCCAGGTTGAAGATGATGCGTCTATCCGCTACGGTTCGCCCCAAATCTACCGCAATCTGGATT TGCTCCGTACCGTACGCGAACGAAACCCCAATGCCTATATCATCTACAAACCGCATCCCGATGTAGTCAGCGGTAACCGC ATCGGCCATATTTCCCCTGAAGATGCTGCACGATATGCCGACCAAACCGCCGAACAAGCCGACATCCTGACCTGTCTCCA ATACGCAGACGAAATACATACCATGACTTCGCTGACCGGTTTTGAAGCCTTGTTGCGCGGCAAAAAAGTCAGCTGCTACG GCCTGCCTTTTTACGCAGGCTGGGGGCTTACCCAAGATCTGCTCCCCATCCCGCGCCGTAGCCGCAGACTTGAGCTTTGG CAGCTGATTGCCGGCACGCTCATCCACTATCCCGACTACATCCACCCCGAAACCCATCAGGCCATAAATGCAGAAACCGC AGCCCAAATCCTGATACGACAAAAAAATATGCAAAAAAACAACAACGGATTACATCGCGGGTGCTTTGCCAAAAAATTAG GTAAAATCAAACAACTATATCGATCTTTCAAATAA Protein sequence : MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLFTLLPEFHICKDGKGAEAVIGWGLRPTTHKARAFAAEHQLPFI ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQAMDFILQHHLSKYNHAPELSD DHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLL AEDINPISLLQNIDKVYCVTSQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNLLQLFAAAYLQY SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARIL AWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAEAPSRLEHILQNQNFDDQDFQTALKL QKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNR IGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELW QLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 0.0 | 99 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 7e-133 | 50 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 9e-133 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NMBM04240196_0091 | YP_005896877.1 | capsule polysaccharide modification protein LipA | VFG0259 | Protein | 0.0 | 99 |
| NMBM04240196_0091 | YP_005896877.1 | capsule polysaccharide modification protein LipA | VFG0704 | Protein | 3e-158 | 58 |
| NMBM04240196_0091 | YP_005896877.1 | capsule polysaccharide modification protein LipA | VFG0692 | Protein | 2e-180 | 58 |
