Gene Information

Name : ctrA (NMBM04240196_0078)
Accession : YP_005896864.1
Strain : Neisseria meningitidis M04-240196
Genome accession: NC_017515
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export outer membrane protein CtrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 83190 - 84365 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence : 
GTGTTTAAAGTGAAATTTTATATTCGTCACGCAGTATTATTATTGTGTGGAAGTTTAATTGTAGGATGCTCTGCGATTCC
TTCATCAGGCCCCAGCGCAAAAAAAATTGTCTCTTTAGGGCAACAATCTGAAGTTCAAATTCCTGAAGTGGAGCTGATTG
ATGTGAATCATACGGTTGCTCAGTTATTATATAAGGCTCAGATAAATCAGTCATTCACTCAGTTTGGCGATGGTTATGCT
TCGGCTGGTACGCTAAATATTGGTGATGTATTGGATATTATGATTTGGGAAGCGCCGCCGGCAGTATTGTTTGGTGGTGG
CCTTTCTTCGATGGGCTCGGGTAGTGCGCATCAAACTAAGTTGCCAGAGCAGTTGGTCACGGCACGTGGTACGGTTTCTG
TGCCGTTTGTTGGCGATATTTCGGTGGTCGGTAAAACGCCTGGTCAGGTTCAGGAAATTATTAAAGGCCGCCTGAAAAAA
ATGGCCAATCAGCCACAAGTGATGGTGCGTTTGGTGCAGAATAATGCGGCGAATGTGTCGGTGATTCGTGCTGGGAATAG
TGTGCGTATGCCGCTGACGGCAGCCGGTGAGCGTGTGTTGGATGCGGTGGCTGCGGTAGGTGGTTCAACGGCAAATGTGC
AGGATACCAATGTGCAGCTAACACGTGGCAATGTGGTGCGCACGGTGGCTTTGGAAGATTTGGTGGCCAATCCGCGGCAA
AATATTTTGTTGCGCCGTGGTGATGTGGTGACGATGATTACCAATCCCTACACTTTTACGTCTATGGGTGCGGTGGGGAG
AACACAAGAAATCGGTTTTTCAGCCAGAGGCTTATCGCTTTCTGAAGCCATTGGCCGTATGGGCGGTTTGCAAGATCGCC
GTTCTGATGCGCGTGGTGTGTTTGTGTTCCGTTACACGCCTTTGGTGGAATTGCCGGCAGAACGTCAGGATAAATGGATT
GCGCAAGGCTATGGCAGTGAGGCGGAGATTCCGACGGTATATCGTGTGAATATGGCTGATGCGCATTCGCTATTTTCTAT
GCAGCGCTTTCCTGTGAAGAATAAAGATGTATTGTATGTGTCGAATGCGCCGTTGGCTGAAGTGCAGAAATTCTTGTCGT
TTGTGTTCTCGCCGGTTACCAGTGGCGCGAACAGTATTAATAATTTAACTAATTAA

Protein sequence : 
MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYA
SAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI
AQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 4e-177 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrA YP_005896864.1 capsule polysaccharide export outer membrane protein CtrA VFG0255 Protein 2e-177 100
ctrA YP_005896864.1 capsule polysaccharide export outer membrane protein CtrA VFG0699 Protein 2e-100 53
ctrA YP_005896864.1 capsule polysaccharide export outer membrane protein CtrA VFG0687 Protein 2e-100 53
ctrA YP_005896864.1 capsule polysaccharide export outer membrane protein CtrA VFG2566 Protein 6e-72 42