Gene Information

Name : ctrB (NMBM04240196_0077)
Accession : YP_005896863.1
Strain : Neisseria meningitidis M04-240196
Genome accession: NC_017515
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein CtrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 82012 - 83175 bp
Length : 1164 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGAGCAACTTCCTGTGGCAGTTGCCACTGAAACCAAAGCCGAGCGTAAAAAGCCGAAAAAGAAAAGTTGGATTAA
AAAGCTAAGCCCTTTATTTTGGGTAACGGTGATTATCCCTACGGTAATTTCGTTGGTGTATTTCGGCTTCTTCGCTTCCG
ATCGTTTTACGTCGCAATCGAGCTTTGTGGTGCGCTCGCCTAAAAGCCAATCTTCTCTCAATGGCCTGGGTGCCATTTTG
CAGGGCACAGGTTTTGCCCGTGCGCAAGATGATATTTACACGGTTGGGGAGTATATGCGTTCGCGCTCGTCTTTGGATGA
ACTGCGTAAAATCTTGCCGGTGCGTGAGTTTTATGAAACCAAAGGTGATGCGTTCAGCCGCTTTAATGGGTTTGGGTTCC
GTGGCGAGGAAGAGGCTTTTTATCAATACTATAAAAATCAGGTGATGATCAATTTTGATACGGTTTCGGGTATTTCCACG
TTGAATGTAACTTCCTTTGATGCGCTGGAATCTAAGAAAATCAATGAGGCTTTGTTAAAACAAGGTGAAGCATTGATTAA
CCAGTTGAACGATCGTGCACGTGCTGATACGGTGCGCTATGCGGAAGAAGTAGTGAAAACGGCGGCAGAGCGGGTAAAGG
AAGCCTCTCAGAATCTGACGGATTACCGGATTGCCAATGGCGTTTTTGATTTGAAAGCGCAATCGGAAGTGCAAATGGGG
TTGGTTTCCAAGCTGCAAGATGAATTGATTGTGATTCAAACCCAGCTGGATCAGGTGAAAGCAGTCACTCCGGAGAATCC
GCAGATTCCGGGTTTGCAGGCGCGTGAGCAGAGCTTGCGTAAAGAAATTGACCAACAGTTACGTGCCATTTCGGGCGGTG
GGCATTCTTCGTTGTCTAATCAGGCTGCCGAATATCAGCGTGTGTATTTGGAAAACCAGTTGGCAGAGCAGCAGTTGGCA
GCCGCCATGACTTCTTTGGAAAGTGCCAAGGTTGAAGCAGACCGTCAGCAGCTTTATTTGGAAGTGATCTCGCAACCGAG
CCTGCCGGATTTGGCACATGAGCCTAAACGGTTATACAACATTGTTGCCACTCTGATTATCGGCTTGATGGTTTATGGTA
TTTTGAGCCTGTTGACTGCCAGCATTCGTGAGCATAAAAACTGA

Protein sequence : 
MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAIL
QGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG
LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLA
AAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-158 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrB YP_005896863.1 capsule polysaccharide export inner-membrane protein CtrB VFG0256 Protein 2e-158 100
ctrB YP_005896863.1 capsule polysaccharide export inner-membrane protein CtrB VFG0686 Protein 5e-101 62
ctrB YP_005896863.1 capsule polysaccharide export inner-membrane protein CtrB VFG0698 Protein 5e-101 62
ctrB YP_005896863.1 capsule polysaccharide export inner-membrane protein CtrB VFG2565 Protein 1e-63 43