Gene Information

Name : ctrD (NMBM04240196_0075)
Accession : YP_005896861.1
Strain : Neisseria meningitidis M04-240196
Genome accession: NC_017515
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein CtrD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 80568 - 81218 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTCAGTTGAACACGTTTCCAAACGCTATCTGACCCGCCAAGGTTGGCGGACAGTCTTGCACGATATTAGCTTCAA
AATGGAGAAGGGCGAGAAAATCGGTATTCTCGGCCGCAACGGTGCAGGTAAATCGACGCTCATCCGTTTGATCAGTGGCG
TTGAGCCGCCGACCACGGGTGAAATCAAGCGGACAATGAGTATTTCTTGGCCTTTGGCATTCTCCGGTGCGTTTCAAGGC
AGTCTGACCGGTATGGACAATTTGCGTTTCATCTGCCGGATTTACAATGTCGATATCGATTATGTGAAAGCGTTTACGGA
AGAATTTTCGGAGCTGGGGCAATATTTGTATGAGCCGGTGAAACGCTATTCTTCAGGTATGAAAGCGCGTTTGGCTTTTG
CGCTGTCGTTGGCGGTGGAGTTTGACTGTTACCTGATTGACGAAGTGATTGCAGTTGGTGACTCGCGTTTTGCCGATAAA
TGTAAGTACGAGTTGTTTGAAAAGCGCAAAGACCGTTCCATCATCTTGGTGTCGCACAGCCACAGCGCCATGAAGCAATA
TTGCGATAATGCGATGGTGCTGGAAAAAGGGCATATGTACCAGTTTGAAGATATGGACAAAGCCTACGAATATTATAATT
CGCTGCCTTAA

Protein sequence : 
MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGKSTLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNVDIDYVKAFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-100 100
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 9e-44 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrD YP_005896861.1 capsule polysaccharide export ATP-binding protein CtrD VFG0258 Protein 1e-100 100
ctrD YP_005896861.1 capsule polysaccharide export ATP-binding protein CtrD VFG0696 Protein 1e-85 82
ctrD YP_005896861.1 capsule polysaccharide export ATP-binding protein CtrD VFG2563 Protein 2e-63 59
ctrD YP_005896861.1 capsule polysaccharide export ATP-binding protein CtrD VFG1449 Protein 3e-44 48