Gene Information

Name : NMBM01240149_0072 (NMBM01240149_0072)
Accession : YP_005894925.1
Strain : Neisseria meningitidis M01-240149
Genome accession: NC_017514
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein CtrC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 79611 - 80408 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTGTTGATGCGGGA
AATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATTCGTTATCG
TCTTGATGTGGAAATTTTTAAGGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCTATCCGATG
TTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCACCGCAATGT
AAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGATTATGGCGG
TATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGGCTTTTTTT
GCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACATTGACTTT
TGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATTAATGATTC
CGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTTGGTATATC
GTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCGCAATGA

Protein sequence : 
MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPM
LMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYI
VLCNLVLLLFGLAMVSKFSKGVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-115 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBM01240149_0072 YP_005894925.1 capsule polysaccharide export inner-membrane protein CtrC VFG0257 Protein 2e-115 100
NMBM01240149_0072 YP_005894925.1 capsule polysaccharide export inner-membrane protein CtrC VFG0697 Protein 6e-85 71
NMBM01240149_0072 YP_005894925.1 capsule polysaccharide export inner-membrane protein CtrC VFG0685 Protein 6e-85 71
NMBM01240149_0072 YP_005894925.1 capsule polysaccharide export inner-membrane protein CtrC VFG2564 Protein 1e-44 45