Gene Information

Name : NMBG2136_0069 (NMBG2136_0069)
Accession : YP_005892995.1
Strain : Neisseria meningitidis G2136
Genome accession: NC_017513
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein CtrD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 73168 - 73818 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTCAGTTGAACACGTTTCCAAACGCTATCTGACCCGCCAAGGTTGGCGGACAGTCTTGCACGATATTAGCTTCAA
AATGGAGAAGGGCGAGAAAATCGGTATTCTCGGCCGCAACGGTGCAGGTAAATCGACGCTCATCCGTTTGATCAGTGGCG
TTGAGCCGCCGACCACGGGTGAAATCAAGCGGACAATGAGTATTTCTTGGCCTTTGGCATTCTCCGGTGCGTTTCAAGGC
AGTCTGACCGGTATGGACAATTTGCGTTTCATCTGCCGGATTTACAATGTCGATATCGATTATGTGAAGAACTTTACCGA
AGAGTTTTCCGAGTTGGGGCAATATCTTTACGAGCCGGTCAAGCGTTATTCTTCAGGTATGAAGGCGCGTTTGGCATTTG
CTTTGTCGTTGGCGGTAGAGTTTGATTGCTATCTGATTGACGAAGTGATTGCAGTTGGCGACTCGCGCTTTGCCGATAAA
TGTAAGTACGAGTTGTTTGAAAAGCGCAAAGACCGTTCCATCATCTTGGTGTCGCACAGCCACAGCGCCATGAAGCAATA
TTGCGATAATGCGATGGTGCTGGAAAAAGGGCATATGCACCAGTTTGAAGATATGGACAAAGCCTACGAATATTATAATT
CGCTACCTTAA

Protein sequence : 
MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGKSTLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNVDIDYVKNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-99 99
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-44 47
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBG2136_0069 YP_005892995.1 capsule polysaccharide export ATP-binding protein CtrD VFG0258 Protein 1e-99 99
NMBG2136_0069 YP_005892995.1 capsule polysaccharide export ATP-binding protein CtrD VFG0696 Protein 9e-87 83
NMBG2136_0069 YP_005892995.1 capsule polysaccharide export ATP-binding protein CtrD VFG2563 Protein 3e-62 59
NMBG2136_0069 YP_005892995.1 capsule polysaccharide export ATP-binding protein CtrD VFG1449 Protein 8e-45 47