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Name : pilF (NMAA_1660) Accession : YP_005892655.1 Strain : Neisseria meningitidis WUE 2594 Genome accession: NC_017512 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilF Function : - COG functional category : - COG ID : - EC number : - Position : 1912983 - 1914443 bp Length : 1461 bp Strand : - Note : MultiFUN-ID: 6.5 DNA sequence : ATGGGGGTGTTGACGGAGGAGCAGATGGTGGAGTTCCACTGTGTGCCGGTTTTCCGTCGGGGCGACAAAGTATTTTTTGC GGTTTCCGATCCGACACAGATGCCGCAAATTCAGAAAACCGTTTCTGCCGCAGGGATTGAGGTTGAGTTGGTCATTGTCG AGGATGACCAGTTGGCGGGTTTGCTCGATTGGGTGGGTTCGCGTTCGACATCGCTGCTTCAGGAGCTTGGGGAGGGGCAG GAGGAAGAGGAAAGCCACACCCTGTATATCGACAACGAGGAGGCAGAAGACGGCCCTGTTCCGAGGTTTATCCATAAGAC TTTGTCGGATGCCTTGCGCAGCGGGGCATCGGACATCCATTTCGAGTTTTACGAACACAATGCCCGTATCCGTTTCCGTG TGGACGGGCAGCTCCGCGAGGTGGTTCAGCCGCCCATTGCGGTAAGGGGGCAGCTTGCTTCCCGGATTAAGGTAATGTCG CGTTTGGACATTTCCGAAAAACGGATACCGCAGGACGGCAGGATGCAGCTGACCTTTCAAAAGGGCGGCAAGCCTGTCGA TTTCCGTGTCAGCACATTGCCGACGCTGTTTGGCGAAAAGGTCGTGATGCGGATTTTGAATTCCGATGCCGCGTCTTTGA ACATCGACCAGCTCGGTTTTGAGCCGTTTCAGAAAAAATTGTTGTTGGAAGCGATTCACCGTCCCTACGGGATGGTGCTG GTAACCGGTCCGACGGGTTCGGGTAAGACGGTGTCGCTCTATACCTGTTTGAATATTTTGAATACGGAGTCGGTAAATAT TGCAACGGCGGAAGACCCTGCCGAGATTAACCTGCCGGGCATCAATCAGGTTAACGTCAATGATAAGCAGAGTCTGACTT TTGCCGCTGCTTTGAAGTCTTTCCTGCGTCAGGACCCGGACATCATTATGGTCGGTGAGATTCGTGATTTGGAAACTGCC GATATTGCGATTAAGGCGGCACAAACAGGGCATATGGTGTTTTCCACCCTGCACACCAATAATGCGCCGGCGACGTTGTC GCGTATGCTGAATATGGGTGTCGCGCCGTTTAATATTGCCAGTTCGGTCAGCCTGATTATGGCGCAGCGTCTTTTACGCA GGCTGTGTTCGAGCTGCAAACAGGAAGTGGAACGCCCGTCTGCCTCTGCTTTGAAGGAAGTCGGCTTCACCGATGAGGAC CTTGCAAAAGATTGGAAACTTTACCGCGCCGTCGGTTGCGACCGTTGCCGGGGGCAGGGTTATAAGGGGCGTGCGGGCGT GTATGAGGTTATGCCCATCAGCGAAGAAATGCAGCGTGTGATTATGAACAACGGTACGGAAGTGGATATTTTGGACGTTG CCTATAAGGAGGGTATGGTGGATTTGCGCCGGGCCGGTATTTTGAAAGTTATGCAGGGCATTACTTCATTGGAAGAGGTA ACGGCAAATACCAACGATTAG Protein sequence : MGVLTEEQMVEFHCVPVFRRGDKVFFAVSDPTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQ EEEESHTLYIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPIAVRGQLASRIKVMS RLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMRILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVL VTGPTGSGKTVSLYTCLNILNTESVNIATAEDPAEINLPGINQVNVNDKQSLTFAAALKSFLRQDPDIIMVGEIRDLETA DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSSCKQEVERPSASALKEVGFTDED LAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEEMQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEV TANTND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-80 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-81 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG0233 | Protein | 0.0 | 99 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG0112 | Protein | 3e-121 | 55 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG1880 | Protein | 8e-120 | 52 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG2426 | Protein | 9e-95 | 50 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG0182 | Protein | 5e-86 | 48 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG1876 | Protein | 6e-77 | 45 |
| pilF | YP_005892655.1 | type IV pilus biogenesis protein PilF | VFG2048 | Protein | 1e-81 | 45 |
