Gene Information

Name : NGTW08_1867 (NGTW08_1867)
Accession : YP_005890685.1
Strain : Neisseria gonorrhoeae TCDC-NG08107
Genome accession: NC_017511
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1828633 - 1831227 bp
Length : 2595 bp
Strand : +
Note : -

DNA sequence :
ATGTCCAAATCCGCCGTTTCCCCAATGATGCAGCAATACCTCGGCATAAAAGCGCAACATACCGACAAACTAGTGTTTTA
CCGTATGGGTGATTTTTACGAGCTGTTTTTGGATGACGCGGTGGAAGCGGCGAAATTGTTGGACATCACCCTGACCACAC
GCGGGCAGATGGACGGCGTGCCGATTAAAATGGCGGGCGTTCCGTTTCACGCGGCGGAACAGTATCTGGCGCGCCTGGTC
AAGTTGGGCAAAAGCGTGGCGATTTGCGAACAGGTCGGCGAAGTCGGCGCGGGCAAAGGGCCGGTGGAGCGCAAAGTCGT
GCGCATCGTAACGCCCGGCACGCTAACCGATTCCGCATTACTGGAAGACAAGGAAACCAACCGCATCGTTGCCGTGTCTC
CCGACAAAAAATACATCGGTTTGGCGTGGGCATCGCTGCAAAGCGGCGAATTCAAAACCAAGCTGACAACTGCGGATAAA
TTGAACGACGAACTGGCGCGCCTGCAGGCGGCGGAAATTTTGCTGCCGGACAGTAAAAACGCACCGCAACTTCAGACGGC
ATCGGGTGTTACACGCCTGAACGCGTGGCAGTTTGCCGCCGACGCGGGGGAAAAACTGCTGACGGAATATTTCGGCTGCC
AAGATTTGCGCGGCTTCGGTTTGGACAGCAAAGAACACGCCGTTTCGATTGGCGCGGCAGGTGCGCTGTTGAACTATATC
CGCCTGACGCAAAACCTGATGCCGCAACATTTGGACGGCCTGTCGCTCGAAACCGACAGCCAATATATCGGCATGGATGC
CGCCACGCGCCGCAATCTCGAAATCACGCAAACCCTCTCCGGCAAAAAAACGCCGACCCTGTTTTCCATACTCGACGGCT
GCGCCACCCACATGGGCAGCCGCCTGTTGGCATTGTGGCTGCACCACCCTTTACGCAACCGCGCCCACATCCGAGCGCGC
CAAGAAGCCGTAACCGCGCTGGAAAGCCAATACGAACCCCTCCAATGCCATCTGAAGAGCATTGCCGACATCGAACGTAT
CGCCGCCCGCATCGCCGTCGGCAATGCCCGCCCGCGCGATTTGGCATCTTTACGCGACAGTCTGTTCGAGTTGGCACAAA
TCGACTTGTCCGCAACCGGCAGCAGCCTGTTGGAAACCCTTAAAGCCGTTTTCCCCGAAACCCTGCCAGTTGCCGAAACC
CTCAAAGCCGCCGTGATGCCCGAACCTTCCGTCTGGCTGAAAGACGGCAATGTCATCAACCACGGTTTTCATCCCGAACT
GGACGAATTGCGCCGCATTCAAAACCATGGCGACGAATTTTTGCTGGATTTGGAAGCCAAGGAACGCGAACGTACCGGTT
TGTCCACACTCAAAGTCGAGTTCAACCGCGTTCACGGCTTTTACATTGAATTGTCCAAAACCCAAGCCGAACAAGCACCT
GCCGACTACCAACGCCGGCAAACCCTCAAAAACGCCGAACGCTTCATCACGCCGGAACTGAAAGCCTTTGAAGACAAAGT
GCTGACTGCTCAAGACCAAGCCCTCGCCTTAGAAAAACAACTCTTTGACGGCGTATTGAAAAACCTTCGGACGGCATTGC
CGCAGCTTCAAAAAGCCGCCAAAGCCGCCGCCGCGCTGGACGTGTTGTCCACATTTTCAGCCTTGGCAAAAGAGCGGAAC
TTTGTCCGTCCCGAGTTTGCCGACTATCCGGTTGTCCACATCGAAAACGGCCGCCATCCCGTTGTCGAACAGCAGGTACG
CCACTTCACAGCCAACCACACCGACCTCGACCACAAACACCGCCTCATGCTGCTCACCGGCCCCAATATGGGCGGCAAAT
CCACCTATATGCGCCAAGTCGCGCTGATTGTTTTATTGGCACACACCGGCTGTTTCGTGCCTGCCGATGCCGCCACAATC
GGGCCTGTCGATCAAATCTTCACCCGCATCGGCGCATCGGACGACCTCGCCTCCAACCGCTCCACCTTCATGGTCGAAAT
GAGCGAAACCGCCTACATCCTGCATCACGCCACCGAACAAAGCATTGTTTTAATGGACGAAGTCGGACGTGGTACTTCCA
CTTTCGACGGCCTCGCCCTCGCGCACGCAATCGCCGAACACCTGCTGCAAAAAAACAAATCCTTCAGCCTGTTTGCCACC
CACTATTTCGAGCTGACCTACCTGCCCGAAGCCCACGCCGCCGCCGTCAATATGCACCTTTCCGCGCTCGAACAGGGACG
GGACATCGTGTTCCTGCACCAAATCCAACCCGGTCCCGCCGGAAAAAGCTACGGCATCGCCGTCGCCAAACTCGCCGGCC
TGCCTGTGCGCGCATTGAAAGCCGCCCAAAAGCATTTGAACGGACTGGAAAACCAAGCCGCCGCAAACCGTCCCCAACTG
GATATTTTCAGTACCATGCCGTCTGAAAAAGGAGATGAACCGAATGTGGACTGCTTTGTGGATAAAGCAGAGGAAAAACA
TTTTGAAGGTATATTGGCAGCAGCCCTGGAAAACCTCGATCCCGACAGCCTGACCCCGCGCGAAGCATTGTCAGAACTGT
ACCGTCTGAAAGATTTGTGCAAATCCGTATCTTAA

Protein sequence :
MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLV
KLGKSVAICEQVGEVGAGKGPVERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTADK
LNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRGFGLDSKEHAVSIGAAGALLNYI
RLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEITQTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRAR
QEAVTALESQYEPLQCHLKSIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFPETLPVAET
LKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGLSTLKVEFNRVHGFYIELSKTQAEQAP
ADYQRRQTLKNAERFITPELKAFEDKVLTAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERN
FVRPEFADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATI
GPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSIVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLFAT
HYFELTYLPEAHAAAVNMHLSALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQKHLNGLENQAAANRPQL
DIFSTMPSEKGDEPNVDCFVDKAEEKHFEGILAAALENLDPDSLTPREALSELYRLKDLCKSVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 2e-167 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGTW08_1867 YP_005890685.1 DNA mismatch repair protein MutS VFG0562 Protein 8e-178 50