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Name : HP15_p42g25 (HP15_p42g25) Accession : YP_005888075.1 Strain : Genome accession: NC_017508 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 19642 - 21702 bp Length : 2061 bp Strand : + Note : - DNA sequence : ATGAAACTATTTATTGCAGAAAAACCCTCGGTAGCAAAAGCCATTGCCGCCGAGCTAGGCGTTACCGGAAAGGGTGACGG TTACATTGAATGCGGCGGTGACAAAGTTACCTGGTGTTTCGGCCACATGCTGGAGCAAGCCGGGCCTGATGAATACACCC CTGATGATGTGCCAACAAATGACAAGGGGCGCAAAATTTGGCGCGTTGATGAACTGCCAATTATCCCGGATGAATGGATT TTAAGGCCCAAGGATGACGCCAAGAAACAGGTTCGAGTTATCGGAGGTCTGCTTAAATCCGCATCGCAAATCGTGAACGC TGGCGACCCCGACCGTGAGGGCCAGTTACTGGTTGATGAACTGCTGGAGCACTTCAATAACAAAAAGCCGGTGATCCGCT ATTGGTCGAACGCCATTGACTCGGTATCCGTTAAGCGAGCACTGGCGAACATGAAAGACAACCAGGAATACCACGGCTTT GCAGACGCTGCCGAAGGGCGCGGCAAGGCTGACTGGCTTATTGGTATGAACCTGTCCCGTGCTTATACCCTGAGAGCGCA GCGGGGCGGCTCCAGGGCGTTGTTGACCGTTGGACGAGTGCAAACCCCTACACTTGCCCTGGTTGTTACCAGGGACCGCG AAATTGAGTCATTCAAGGCGGTGCCCTTCCACACTATTCGTGCCGAAATTCAGCACCCGAACGGCGCTTTTTGGGCGAGC TGGAAGGCAAAAGAAGATCAAGCGGGCCTCGATGCGGAAGGCAGGCTTGTAGACACTGCCGTTGCGAATGCCTTGGTTGA ATCGCTCACTGGTAAGCCTGGCTCTATCAGCGAATACAAGCAGGAAGCCAAAAAGCAAAATCACCCGCTGACATTCAGCC TGTCCGACATGACCGCCCTGGCGTCAAAACGCTTCGGTTATAGCGCCGAGGACGTGCTTAAAACCTGTCAGTCATTGTAC GAGACACACAAGCTGACCACATACCCACGAACCGATTGTGCTTACTTGCCGGAATCTCAATTTGCAGACGCCCCGGACGT GCTGGCATCGGTAAAAGCTGTGAACCCTAGCCTGGCGTCCATTGTTGATGGAGCGGATACCAGTATCCGGTCCCGTACCT GGAACGATAAAAAGGTGTCGGCGCACCACGGGATTATCCCGACGATGCACAAAGGCGATCTAAACAAGCTCAATGACAAA GAGCGCAATATCTATGACCTGGTTGTGCGGGCATACCTGGCACAGTTTTACCCGGTTCATGAGTTTATGAGCACGACCGT TACCGTCGATGTTGAAGGCGAGACGTTTAGCGCAAAAGGCAAAGTAGTCACTAAAAGCGGCTGGCATGACGTGTACCTGG ACAATTCAGACGAGGACGACAGCGATCAGGACGACGAAAGCCAGTCACTCCCCAAGATGGGCCAAGGTGACGCGATTACT TGCGGCCAAGCCGCAAGAAGGGACGCCAAGACGAAGCCACCGGCTCGATTCACCGAAGGTACGTTGATCACTGCAATGGT GAATATTCACCGCTTTGTTACTGACCCACAGCACAAGAAGATGCTGCGCGAAGGTGACGGGATCGGCACCGAGGCAACGC GGGCATCCATCATTTCCGAATTAAAGCGCCGCAATTATCTGGAGACTAAGGGCAAGCAAATTATTAGCACTACCTTGGGC CGAAGCATGATCGACGCCCTGCCGGAAGTAGTGAAAAGCCCGGTGCTTACTGCCCTTTATGAACGAATGCTGCAAAGCGT TGAATCGGGCAAAGCTGACTTGGCTGCGTTTATCACCAAACAAGAGGCGTTTATTAGGGAGCAGGTTGCCAAAGCCAATG ACGGCGCGGTTGCTATTGCAGGCGGCAAAGAGGCGGCCCCGGTTTCCGATGTATTCAAGTGCATGTCGTGCGGGGCTGGC TTGTCCCGCCGACCACTACCGAAGAAGAAAGGTCACTTTTGGTGGGGGTGCTCCAATTACCCGACCTGCAAGCAGACCTA TCCCGATGTTAAAGGCCGTCCCAACTACAGCAAGGGACGCAACAATACCGACAAGGAGTAA Protein sequence : MKLFIAEKPSVAKAIAAELGVTGKGDGYIECGGDKVTWCFGHMLEQAGPDEYTPDDVPTNDKGRKIWRVDELPIIPDEWI LRPKDDAKKQVRVIGGLLKSASQIVNAGDPDREGQLLVDELLEHFNNKKPVIRYWSNAIDSVSVKRALANMKDNQEYHGF ADAAEGRGKADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVTRDREIESFKAVPFHTIRAEIQHPNGAFWAS WKAKEDQAGLDAEGRLVDTAVANALVESLTGKPGSISEYKQEAKKQNHPLTFSLSDMTALASKRFGYSAEDVLKTCQSLY ETHKLTTYPRTDCAYLPESQFADAPDVLASVKAVNPSLASIVDGADTSIRSRTWNDKKVSAHHGIIPTMHKGDLNKLNDK ERNIYDLVVRAYLAQFYPVHEFMSTTVTVDVEGETFSAKGKVVTKSGWHDVYLDNSDEDDSDQDDESQSLPKMGQGDAIT CGQAARRDAKTKPPARFTEGTLITAMVNIHRFVTDPQHKKMLREGDGIGTEATRASIISELKRRNYLETKGKQIISTTLG RSMIDALPEVVKSPVLTALYERMLQSVESGKADLAAFITKQEAFIREQVAKANDGAVAIAGGKEAAPVSDVFKCMSCGAG LSRRPLPKKKGHFWWGCSNYPTCKQTYPDVKGRPNYSKGRNNTDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-122 | 42 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-122 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-122 | 42 |
