Gene Information

Name : HP15_523 (HP15_523)
Accession : YP_005884215.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : two component Fis family sigma54-specific transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 536554 - 537942 bp
Length : 1389 bp
Strand : -
Note : -

DNA sequence : 
ATGACCAAATACACAGCGCTGATCGTTGATGATGAACCGGACATCCGGGAGTTACTTGAGATCACCCTCACCCGGATGGG
CATAACAACCCTCACGGCACCCGACCTCACCAGCGCCCAGAAATTGCTGGAACAGAACACCACCCACCTCTGCCTGACCG
ACATGAACCTGCCAGACGGTAATGGCATTGAACTGGTCCAGTGGATTCAGAAACACTCTCCGGCCACGCCTGTTGCCGTG
ATCACAGCGTACGGCAACATGGACACCGCGATTGAATCGCTCAAAGCCGGGGCTTTTGATTTCGTGTCCAAACCGGTGGA
GCTGCCCCGACTAAGGGAACTGGTCAATAGCGCCCTCAAACTCGCTGAGCCCAAGGCAGACGCGGAAGATACAGCCGACG
AGCCAGGCCTGCTACTCGGCAAATCACCAGAGATTCGAAAACTCCGGAACCAGACCCGAAAACTGGCCCGAAGCCAGGCC
CCCGTGTTTATCAGTGGCGAATCTGGCAGTGGTAAAGAGCTGGTGGCCCGAATGATCCACCTCCAGGGGCCCCGCCGCGA
AGGACCGTTCATCGCGGTTAACTGCGGTGCGATTCCCTCGGAACTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCA
GCTTTACCGGGGCCGTGGAGAACAAAGACGGCCTGTTCCGCTCTGCCAACGGAGGTACCCTATTCCTTGATGAAGTGGCA
GACCTGCCCCTGGCCATGCAGGTGAAACTGCTCCGCGCCATACAGGAAAAAGCCGTTCGGCCAGTCGGGGACACCAAGGA
AGTGCCCGTCGACATTCGGGTACTGAGCGCCACACACAAGAATCTGCCGGAGCTGGTCCAGGAAGGCAGCTTTCGTCAGG
ATCTTTTCTACCGGATTAACGTGATCGAACTCTCAGTGCCACCCCTGAGAGAGCGGCCAGATGATATTTCTCTGCTTTCG
AATCACATTCTTGAACGAATTGCGAAAGAGTATGAGTGTGACCCTGCCTCGTTAACGCCAGCGGCCGTGGACAGACTGCG
AAGCTATGACTTTCCGGGCAATGTCCGGGAACTGGAAAACGTCTTGGAGCGGGCTTTTACCCTGTGCGACGCTGACCAGA
TCGATGCTGATGATCTGCATCTGGGGAATGGTGTTCAGCATGCAGCTTCGGCCTCGCAGATCATTGCCGAGGGCCAGGTT
GGCGATGGGGAAGGAATTGCCGTGCCCGATGGGGAGATTGATCTGGAAGGGTATCTGGAAAAGATTGAACGACAGGCCAT
CGAGAAGGCTCTTGAAGCGACACGGTGGAACAAGACGGCGGCTGCGAAACGACTGGGTATTAGCTTTCGGGCGTTAAGAT
ATCGATTGAAGAAGTTGGGGATGGAGTAG

Protein sequence : 
MTKYTALIVDDEPDIRELLEITLTRMGITTLTAPDLTSAQKLLEQNTTHLCLTDMNLPDGNGIELVQWIQKHSPATPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLAEPKADAEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELSVPPLRERPDDISLLS
NHILERIAKEYECDPASLTPAAVDRLRSYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQV
GDGEGIAVPDGEIDLEGYLEKIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-115 53
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-115 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_523 YP_005884215.1 two component Fis family sigma54-specific transcriptional regulator BAC0467 Protein 6e-70 41
HP15_523 YP_005884215.1 two component Fis family sigma54-specific transcriptional regulator BAC0089 Protein 2e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_523 YP_005884215.1 two component Fis family sigma54-specific transcriptional regulator VFG1214 Protein 2e-141 63
HP15_523 YP_005884215.1 two component Fis family sigma54-specific transcriptional regulator VFG0116 Protein 9e-63 41