Gene Information

Name : ssb (HP15_408)
Accession : YP_005884100.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 404357 - 404881 bp
Length : 525 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACGAGGCGTAAACAAGGTAATCCTAATCGGTAATCTGGGGCAGGACCCGGATACCCGCTACACCCCCAACGGCAA
TGCCGTAGTAAACCTGAACCTTGCAACAGACGAAAGCTACAAGGATCGTCAGACCGGTCAGCTGGTGCCGAAAACCGAAT
GGCACCGGGTTGTCATGTTCGGTAAGATCGCCGAAGTTGCGGGACAGTACCTGCGAAAGGGCTCGAAGGTTTATATTGAG
GGCAAGCTTCAGACCCGCAAATGGCAGAACAAGGAAGGGCAGGATGTCTATACCACCGAGGTTGTGGTGGATATCAATGG
CCAGATGCAGATGCTGGACAGCCGTGGCGGCGAAGGCGGAATGAGCCAGGGCGCGCCGGCAGGGCGGCCTCAGCAGTCCG
GCTACAACGCGCCGGCTGGACAGCAGAACAATCCGCCACCGCAATCCGGTGGCTACAGTAACCAGCCCTCGCAGGGCAGC
ATGCCCGAACCGGTTGACGACTTTGATGATGACATTCCGTTCTGA

Protein sequence : 
MARGVNKVILIGNLGQDPDTRYTPNGNAVVNLNLATDESYKDRQTGQLVPKTEWHRVVMFGKIAEVAGQYLRKGSKVYIE
GKLQTRKWQNKEGQDVYTTEVVVDINGQMQMLDSRGGEGGMSQGAPAGRPQQSGYNAPAGQQNNPPPQSGGYSNQPSQGS
MPEPVDDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-35 53
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-35 53
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-35 53
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_005884100.1 single-stranded DNA-binding protein VFG0576 Protein 3e-36 55