Gene Information

Name : HP15_3947 (HP15_3947)
Accession : YP_005887639.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4176993 - 4177694 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGACGCGAACGGTACTGATTATTGAAGACAACCCCGGCATCGGTGAGCTGGTCCGTATGCAGGTTTCAGATCTGGGAAT
GAAGCCTGTGCTCGTGGACCGGGGGGATACCGGCCTGGAACGGTTCCGTGAGGGCGGCGTCGACCTGGTTATTCTGGATC
TGATGTTGCCTGGCCTGGATGGTTTGGCGGTGTGCCGCGAGATTCGTGCCTGTCCGGGCTACGTACCAGTTCTGATGTTG
ACGGCAAAGAGCACAGAGCTGGATCGGGTCCTGGGCCTGGAGATGGGCGCGGACGATTACCTGACGAAGCCGTTCAGCGT
GGCGGAGCTGGCAGCCCGCATCAAAGCGCTTTTCCGACGGGTAGACGCACTCTCTCAGGCAGCGCCTGCCGGCGATCAGG
CTGATGAGATTGAGGTGGACGGGCTTCGGATTGATCCGGTTCGCCGGCGAGTGTTTGTGGATGATCGGGAAGTGGACCTG
ACCGCCCGCGAGTTCGACCTGCTCTGGCACTTTGCCTCCCATCGGGGCCGGGTGTTCAGCCGGGCGCAATTGCTCGATTC
TGTGTGGGGTTACAACCATGAGGGCTACGAGCATACCGTGAACACCCACATCAACCGACTGCGCAACAAGATTGAAGCCG
ATCCCGCCGACCCACGATACGTCCAGACGGTCTGGGGTGTTGGCTATCGGTTCATGGATTAG

Protein sequence : 
MTRTVLIIEDNPGIGELVRMQVSDLGMKPVLVDRGDTGLERFREGGVDLVILDLMLPGLDGLAVCREIRACPGYVPVLML
TAKSTELDRVLGLEMGADDYLTKPFSVAELAARIKALFRRVDALSQAAPAGDQADEIEVDGLRIDPVRRRVFVDDREVDL
TAREFDLLWHFASHRGRVFSRAQLLDSVWGYNHEGYEHTVNTHINRLRNKIEADPADPRYVQTVWGVGYRFMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-49 54
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-48 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_3947 YP_005887639.1 two-component response regulator NC_012469.1.7685629. Protein 4e-45 44
HP15_3947 YP_005887639.1 two-component response regulator HE999704.1.gene2815. Protein 8e-44 43
HP15_3947 YP_005887639.1 two-component response regulator CP000647.1.gene2531. Protein 3e-33 42
HP15_3947 YP_005887639.1 two-component response regulator NC_002952.2859905.p0 Protein 1e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_007793.3914279.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_003923.1003749.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_007622.3794472.p0 Protein 1e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_002745.1124361.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_009782.5559369.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_002951.3237708.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_002758.1121668.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_009641.5332272.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator NC_013450.8614421.p0 Protein 2e-43 41
HP15_3947 YP_005887639.1 two-component response regulator CP001918.1.gene3444. Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_3947 YP_005887639.1 two-component response regulator VFG1563 Protein 2e-49 54
HP15_3947 YP_005887639.1 two-component response regulator VFG1702 Protein 2e-48 54
HP15_3947 YP_005887639.1 two-component response regulator VFG1389 Protein 2e-28 46