Gene Information

Name : HP15_3484 (HP15_3484)
Accession : YP_005887176.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3669593 - 3670273 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
GTGAAAGCGCTGGTAATCGAAGACGATCAGGACGTTGCAAATTATCTTGTCAAAGGGCTGAAGGAATCCGACTTCGTGGT
CGACCATGCAGCCGATGGCAAGGAAGGCATGATGATGGCGGCCAGCGAGGATTACGACATCATGATTGTAGATCGCATGC
TGCCGGGAATGGACGGTCTGTCCATTATCAAAACCGTGCGTGCGACCGGAAACCAGGTGCCGGTTCTGATTCTCAGCGCC
CTGGGTGATGTGGACGACCGCGTGGAAGGTTTGCGTGGCGGCGGCGATGACTACCTCACCAAGCCGTTTTCATTCACCGA
ATTGTTGGCCCGTATCGAATCCCTGGTGCGCAGAAATCGGCAGTCGGCGGAAACCGAGACCGTACTGCGGGTCGCCGATC
TCGAAATGGATCTGCTTGCACGCACGGTAAAGCGGGCCGGCCAGAATATTGATGTCCAGCCGCGGGAGTTCCGTCTGCTG
GAGTACCTGATGCGTAATGCCGGCCAGGTGGTCACCCGGACCATGTTGCTGGAGAAAGTCTGGGATTACCATTTCGATCC
CCAGACCAACGTTATCGACGTACACATCAGCCGGCTGCGAGCCAAGATCGATAAGGAATTCGATACACCCTTACTGCAGA
CCATCCGGGGTGCAGGGTACATGTTACGTGAAACTGCTTAG

Protein sequence : 
MKALVIEDDQDVANYLVKGLKESDFVVDHAADGKEGMMMAASEDYDIMIVDRMLPGMDGLSIIKTVRATGNQVPVLILSA
LGDVDDRVEGLRGGGDDYLTKPFSFTELLARIESLVRRNRQSAETETVLRVADLEMDLLARTVKRAGQNIDVQPREFRLL
EYLMRNAGQVVTRTMLLEKVWDYHFDPQTNVIDVHISRLRAKIDKEFDTPLLQTIRGAGYMLRETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-45 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0125 Protein 6e-53 52
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0347 Protein 7e-54 50
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0638 Protein 6e-48 50
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0083 Protein 2e-54 49
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0111 Protein 8e-56 47
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0197 Protein 2e-47 46
HP15_3484 YP_005887176.1 DNA-binding response regulator BAC0308 Protein 1e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_3484 YP_005887176.1 DNA-binding response regulator VFG0596 Protein 7e-46 44
HP15_3484 YP_005887176.1 DNA-binding response regulator VFG1389 Protein 3e-38 42