Gene Information

Name : HP15_3467 (HP15_3467)
Accession : YP_005887159.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3653408 - 3656041 bp
Length : 2634 bp
Strand : -
Note : -

DNA sequence :
GTGATTCGGGTAGAACTGCCGGCGCTGATCGGGCGCCTCAACGACATGTCACGCCAGGCACTGGAAGCCTCGGCCGCTTT
GTGCATCAGCCGTCAGGGCGCGGAAATCACTCCGGCCCATTTGCTGTTCAAACTGCTTGAAACGCCGTTTTCCGACGTGC
GCCAGATTCTGGAGCACACCGGCCTTGAGCATCAGCAACTGCAACCGCTGGTAGGCGATAGCCTGAACGGAGAGTCGCAA
AGCGCTGAGCCCTACCCATCGTTCTCTCCGCTGTTGGTGGAGCTGATGCAGGATGCCTGGCTGCTGGCTTCCACCGAACT
GGGGCACACCGAATTGCGTTCCGGCGCGGTATTCCTTGCCCTGCTGATGAATGCCGATCGATACCTGATGCCCCGGGTGG
CAAAGGCAATGGTGGACATCAATCGTGAGCAGCTGCGCAAGCAATTTGACCGGTTCACCGAGGGCTCCGCGGAGAGACTG
GAACCAAGCGAGCAGGAACCCGGGCAACCAGTGGCCAGCGTGGATCTGGACCCGCTCAAACGCTACGCCACCGACTTCAC
CAGACTGGCCCGGGAGGACAAACTGGACCCCGTGGTTTGCCGTGACGCCGAGATCGACCAGATGATCGACATCCTCTGCC
GCCGCCGCAAGAACAACCCGATTGTGGTGGGCGATGCCGGTGTGGGCAAAAGCGCCGTGGTGGAGGGCCTGGCTCTGCGC
ATCGTCAACGGCGACGTGCCTGACCGTTTGAAGAGCGTTGAGCTATGGACCCTGGACATGGGTGCCCTGCAGGCGGGCGC
CTCCGTGAAGGGCGAGTTCGAGAAACGCCTCAAAGGCGTGATCGAGGCGGTCAAAGGCTCGGCTACCCCGATCATCCTGT
TCATTGACGAAGCCCATACCCTGATTGGCGCAGGCAACAGCGAAGGCGGCTCTGATGCTGCCAACCTGCTCAAACCTGCC
CTTGCCAGGGGCGAGCTGCGTACCATCGCAGCGACCACCTGGCGCGAATACAAGAAATACTTCGAAAAAGACCCAGCCCT
GAGCCGCCGTTTCCAGCCTGTGGCGCTGGATGAGCCCACTCCCGGGGAAGCGGTCCACATCCTCCGTGGCTTGCGCACCG
TCTATGAAAAAGCCCATCAGGTACTTATCGCCGACAGCGCCCTGAAAGCCGCCGCCGAAATGTCTGCCCGTTACCTTGCC
GGCCGTCAGCTACCGGACAAAGCCATCGACGTGCTGGATACCGCCTGCGCCCGCGTTAGCCTGAATCTGAGCGCGCCGCC
CAGACGCCTGAGCCGCGTCCGAAGCGAGCTGTATCAGCTGGCCATGGAACAGAACCTGCTGTGCCGGGAACACACCTTGG
GACAGACCGTGGATGCCGAACGGGAACGGGAACTGGAACAGCGCGTTGCCGGGATCACTGTTGAATCTGCAGCCCTGGAA
CAACGCTGGAGCGACCAGCGCGAACTGGTGGCACGACTGGTGGAGATCCGGGAAAAGTTGCTTACCGGCGAATCGCAGGC
TGAAGCGAATACCCCTGAATTGACCGATGGGATAACAGAAGAACGCCCGGACCTGAAAAGCGAAGCCGCCGCCATCGAGC
AGGAACTGACGGAACTCCAGGCCGACGAGCCGTTGGTTCACACCCGGGTTGACGCCAGACAGGTGGCCGAAGTCATTGCC
GACTGGACTGGTATTCCGGTCAATCGCATGACCACCGACGAACTGGAAAAAATCACCCATTTGCCGGCGTATCTGCAGGA
GCACATCAAAGGCCAGGACACCGCCATCGACTGCCTGCACCAACACCTGCTTACCGCCCGCGCCGACCTGCGCCGGCCCG
GCCGCCCCATGGGCGCCTTCCTGCTGGTGGGACCCAGCGGCGTTGGCAAAACCGAAACCGTGGTACAGCTGGCTGAACTC
CTCTACGGCGGTCGTCAGTTCCTTACTACCATCAACATGTCCGAATACCAGGAAAAACACACCGTCTCCCGTCTGATCGG
CTCGCCCCCCGGCTATGTGGGTTTTGGTGAAGGCGGCATCCTCACCGAAGCCATCCGCCAGAAACCCTACTCCGTGGTCT
TGCTCGACGAAGTCGAAAAAGCCCATCCGGAAGTCCTCAATCTGTTCTACCAGGCATTTGACAAAGGCGAACTGGCCGAT
GGCGAAGGCCGTCTGATCGACTGCAAGAACGTGGTCTTCTTCCTCACCTCAAACCTCGGATACCAGACCATCGTCAACCA
CGCCGAGTCGCCGGCCAGCCTGGACGAAGCTCTCTACCCGGAACTGGCCAGCTTCTTCAAGCCGGCCTTGCTGGCAAGAA
TGGAAGTGGTGCCCTACCTGCCTCTTGGCGAGGAAACCCTCAACCGAATCGTTGGCGACAAACTCCAGCGCCTGGCAGAC
CAGATCAAGGCCCGCTACCACACCGAGGTGGAATTGGAAGAAGGACTTATCGAGGCTATTCGAAACCGTGCGACAAGAAG
TGAAAATGGCGCAAGGATGCTTGAGTCGATCATAGAGGGTGAGTTGTTGCCGCCTGTTTCACTCGCGTTGCTGGAGAAAC
TGGCGGCGAGGGAGCCGGTGAAAAAGGTGACACTGGCGGTCGAAGAGCATCGATTCGTAGGAACTGTTGCCTAG

Protein sequence :
MIRVELPALIGRLNDMSRQALEASAALCISRQGAEITPAHLLFKLLETPFSDVRQILEHTGLEHQQLQPLVGDSLNGESQ
SAEPYPSFSPLLVELMQDAWLLASTELGHTELRSGAVFLALLMNADRYLMPRVAKAMVDINREQLRKQFDRFTEGSAERL
EPSEQEPGQPVASVDLDPLKRYATDFTRLAREDKLDPVVCRDAEIDQMIDILCRRRKNNPIVVGDAGVGKSAVVEGLALR
IVNGDVPDRLKSVELWTLDMGALQAGASVKGEFEKRLKGVIEAVKGSATPIILFIDEAHTLIGAGNSEGGSDAANLLKPA
LARGELRTIAATTWREYKKYFEKDPALSRRFQPVALDEPTPGEAVHILRGLRTVYEKAHQVLIADSALKAAAEMSARYLA
GRQLPDKAIDVLDTACARVSLNLSAPPRRLSRVRSELYQLAMEQNLLCREHTLGQTVDAERERELEQRVAGITVESAALE
QRWSDQRELVARLVEIREKLLTGESQAEANTPELTDGITEERPDLKSEAAAIEQELTELQADEPLVHTRVDARQVAEVIA
DWTGIPVNRMTTDELEKITHLPAYLQEHIKGQDTAIDCLHQHLLTARADLRRPGRPMGAFLLVGPSGVGKTETVVQLAEL
LYGGRQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGILTEAIRQKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELAD
GEGRLIDCKNVVFFLTSNLGYQTIVNHAESPASLDEALYPELASFFKPALLARMEVVPYLPLGEETLNRIVGDKLQRLAD
QIKARYHTEVELEEGLIEAIRNRATRSENGARMLESIIEGELLPPVSLALLEKLAAREPVKKVTLAVEEHRFVGTVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 0.0 57
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 0.0 57
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-140 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_3467 YP_005887159.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 0.0 64
HP15_3467 YP_005887159.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 1e-170 44