Gene Information

Name : HP15_2323 (HP15_2323)
Accession : YP_005886015.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2441571 - 2442965 bp
Length : 1395 bp
Strand : -
Note : -

DNA sequence :
ATGACCTCGAGCCTCGCTGATCGCCTCAACCGCTTTCAGGGTTTTCTGGGAAACGAGCCCGAGCCTGAACTTTCCGGCCG
ACTGACTCGCATGGTGGGCCTTACCCTCGAATGTGTCGGCTGCCCCATGGTGGTCGGTGACCGCTGTGTCATCTTTGGCC
AGAACACCGGTAATGTTGAGGCGGAAGTGGTGGGCTTTGAGGACGACCGAGTGTATCTGATGCCCCTGACAGCAATCGAG
GGGCTCAAGCCCGGTGCCAGGGTTGTGCCTCTGTCTGCCGCAAGCCGGGTGCCGGTTGGCCCCCAGCTGCTTGGCCGGGT
GGTCGATGGCAGTGGTGAGCCCCTGGACGGAAAAGGCCCCTTGCAGGCAGAGGCCCGCGTGGCGCTCACCGGCGATATTA
TCAACCCGCTGAACCGCGCCCCGGTGCGGCAGTCGATGGATGTGGGTATACGGGCGATCAATGCGTTGATGACCGTCGGC
CAGGGGCAGCGCTTGGGTCTGTTTGCCGGCAGCGGCGTGGGCAAGAGTATGTTGCTGGGCATGATGACCCGCTTTACCGA
TGCCGACATCACCGTGGTGGGCCTGATTGGTGAGCGGGGCCGCGAGGTAAAGGAGTTTATCGAAGACATCCTGGGCGAAG
AGGGCCTTTCCCGCTCGGTGGTGGTGGCCGCGCCCGCGGACGATTCGCCACTGATGCGGTTGCGCGCCGCCATGCTGACC
ACCCGGATTGCCGAGTATTACCGGGATCAGGGCAAACGCGTGCTCCTGTTGATGGATTCCCTGACCCGTTACGCCCAGGC
CCAGCGGGAAATTGCGCTGGCCGTGGGTGAGCCGCCGGCGACCAAAGGCTACCCGCCCTCGGTATTTGCCAAACTGCCCC
AGTTGGTGGAGCGAACCGGCAATGGTCGCCCCGGAGGTGGTTCTATCACGGCGTTCTACACCGTACTTACCGAAGGCGAC
GACCAGCAGGATCCGATTGCAGACGCTGCCCGGGCGATTCTGGATGGCCACATCGTACTCTCCCGCCGGCTTGCCGAAGA
GGGACACTATCCCGCCATTGATGTGGAAGCGTCGATCAGCCGGGTGATGCCGCAGGTAACCGAGACCGAACATTTTTCCA
GGGCCCAGCGATTCAAGCAGGTGTACTCACGGTACCAGCAGGCCCGGGATCTGATCTCTGTCGGCGCTTACGTGAAGGGT
TCCGATCCCGAGACCGATTTTGCCATCACTCACATCGGCAATATGCGCCAGTTCCTGCAGCAGGGCCTGAATGAGAGTGC
ACCACTGAAGGAAAGTGTTGACCAGTTGCTGGCGGTGGTGCCAGAGCGTCGTTCCCCCGATCGGCGTAAGTCGGCCGTGC
CGAATCCGGCAGCTGGCGGCGGAGGTGATGCCTGA

Protein sequence :
MTSSLADRLNRFQGFLGNEPEPELSGRLTRMVGLTLECVGCPMVVGDRCVIFGQNTGNVEAEVVGFEDDRVYLMPLTAIE
GLKPGARVVPLSAASRVPVGPQLLGRVVDGSGEPLDGKGPLQAEARVALTGDIINPLNRAPVRQSMDVGIRAINALMTVG
QGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGREVKEFIEDILGEEGLSRSVVVAAPADDSPLMRLRAAMLT
TRIAEYYRDQGKRVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGD
DQQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFSRAQRFKQVYSRYQQARDLISVGAYVKG
SDPETDFAITHIGNMRQFLQQGLNESAPLKESVDQLLAVVPERRSPDRRKSAVPNPAAGGGGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-81 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-81 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-81 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-81 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-81 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-95 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-94 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-89 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-93 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-93 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-93 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-90 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-90 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-93 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-93 48
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-89 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-79 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-79 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-79 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-79 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-79 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-79 47
escN CAI43874.1 EscN protein Virulence LEE Protein 9e-80 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-80 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-80 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-75 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-77 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-78 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-78 46
escN AAC38383.1 EscN Virulence LEE Protein 1e-79 46
escN AAK26715.1 EscN Virulence LEE Protein 2e-79 46
escN AAL57542.1 EscN Virulence LEE Protein 2e-79 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-73 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-73 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-81 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-76 45
unnamed AAL06369.1 EscN Virulence LEE Protein 8e-79 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-78 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-75 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-75 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-75 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-72 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-72 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 8e-67 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-69 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 7e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG1254 Protein 3e-148 69
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG2499 Protein 8e-127 64
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG2331 Protein 2e-120 59
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0515 Protein 6e-82 50
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0048 Protein 4e-89 48
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0192 Protein 3e-94 48
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG2144 Protein 3e-93 47
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0390 Protein 1e-91 47
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0812 Protein 6e-80 47
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG0730 Protein 8e-80 46
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG1008 Protein 5e-62 42
HP15_2323 YP_005886015.1 flagellum-specific ATP synthase FliI VFG2459 Protein 1e-70 42