Gene Information

Name : HP15_2312 (HP15_2312)
Accession : YP_005886004.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2433808 - 2434584 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence :
ATGCTTGCGGCAACCATCAAGCGACTGCTTCCATCCCTGATTGTCTTGGCGGGCTTTGTCTGGGCGCCACTGGCGCTGGC
TCAGGAGCCTTCCGGCATCCCCGGTATACCGGCTTTCACAGTGACGCCCGGAGAAGGCGAGGGCGCCCAGGAATACTCGG
TAACCCTGCAGATACTGGCGCTGATGACAGCGCTGACGTTCCTGCCGGCCATGCTTATGATGATGACGTCTTTTACCCGC
ATCATCGTTGTGTTTGCGATCCTGCGCCAGGCAATTGGCCTGCAATCCACACCGTCGAACCAGATTCTTCTCGGCCTGGC
CCTGTTTCTCAGCATCTTCATCATGAAACCGGTGCTTGAGGAGGCCAACCGGGTGGCGCTGCAACCCTACATGCAGGAGG
AAGTAACCTCCCTGGAGGCGGTCGAGCTGGCAAGCCAACCGTTCCGGAAATTCATGCTGGAACAGACCCGTGAGAGCGAT
CTGGCCCTGTTCATGAGGATCTCTGACACGCAGTACGAGACGCCGCAGGACGTGTCTTTCTGGATCCTGATGCCGGCATT
CGTGACCAGTGAACTCAAGACCGCATTCCAGATCGGGTTTATCCTGTTTATACCGTTTCTGATTATCGACATGGTGGTGG
CCAGTGTTCTCATGGCCATGGGTATGATGATGCTGTCGCCGATCATCATCTCCCTGCCGTTCAAGATCATGCTCTTTGTT
CTGGTGGATGGCTGGGCCCTGATCATGGGCACACTCGCCGCCAGTTACGGAATATAG

Protein sequence :
MLAATIKRLLPSLIVLAGFVWAPLALAQEPSGIPGIPAFTVTPGEGEGAQEYSVTLQILALMTALTFLPAMLMMMTSFTR
IIVVFAILRQAIGLQSTPSNQILLGLALFLSIFIMKPVLEEANRVALQPYMQEEVTSLEAVELASQPFRKFMLEQTRESD
LALFMRISDTQYETPQDVSFWILMPAFVTSELKTAFQIGFILFIPFLIIDMVVASVLMAMGMMMLSPIIISLPFKIMLFV
LVDGWALIMGTLAASYGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-23 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-24 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-24 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-24 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-24 43
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-23 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-27 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-24 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG1259 Protein 6e-62 66
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-53 60
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-48 59
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-53 59
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-25 41
HP15_2312 YP_005886004.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-24 41