Gene Information

Name : HP15_1603 (HP15_1603)
Accession : YP_005885295.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : general secretion pathway protein F
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1700388 - 1701599 bp
Length : 1212 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGCATACGAATACAAGGCTCTCGATTCCCGAGGCAAGCAAAAACAAGGTGTCGTGGAAGCAGATGCGCCGAGAGC
CGTTCGCCAGCAACTTCGGGAGCGAGGCCTAACGCCGCTGGCCGTCGAGCCGGCCGCCGAGAAACAGACCAGGAGCAATC
CCCTGAGCAGCCGGGGTTCGCTGGCCGCGGCCGATCTGGCACTGGTTACACGCCAACTGGCAACCCTGATCCAGTCCGGC
ATTCCCATTGAGCAGGCGCTCTCGGCTGCTGCTCAGCAGTCACCGAAACCCAGAATACGCAGCATGCTGATCGCCATACG
CGCGAAAGTCATGGAAGGCTACACCCTGGCGGACAGCCTGGGTGAGTTCCCCCGGGCATTCCCGAGGCTGTACCGGTCTA
CCGTTGCGGCCGGTGAGCACGCCGGCCATCTCGATCTGGTTCTGAACCGGCTGGCGGATTACACCGAAAACCGTCAGGAG
GCGCGCCAGAAAATTCAGCTGGCGGCCATCTACCCCATCATTCTCAGTATCGTCGCCATTGCCATCGTCGTGTTCCTGCT
GACCTACGTGGTGCCGGATATCATCGATGTGTTTCTGAAGCAGGGGCAGGAGTTGCCAACGCTGACCATGGCCATGCTTG
CGGTGTCGGAATTTCTGGCGGATTACGGTGTCTATCTATTTATACTGCTGGTCGCCGCATTGATGGTGTTCCGCTTTTTC
CTGACCAAGCCCGGGTTTAGACTGCGGTTTCACAAACGTCTGTTACATCTCCCCTTGTTTTCAGGGATGGTTCGTGGCGT
TAACACTGCCCGCTATGCCAGCACCCTCAGCATACTGACGACCAGTGGCGTGCCGCTGGTAGAGGCAATGCGCATTGCCG
GTGAGGTGTTATCCAACGATTTTCTGCGGCAGGAACTGCGGGATGCAGCCAGAAAGGTCAGCGAAGGCGGCTCATTGCAC
CGTTCCCTTGATCAGACCGGGTATTTTCCGCCGATGATGCTGCACATGATCGCCAGCGGGGAGGCCAGTGGTGAGCTGGA
CAGCATGCTGGAACGAACCGCGCGCATGCAGGAAAACACCCTTCAATCAAAGATCGCTGCGATTGTGGGGCTGTTCGAGC
CGATGATGCTACTGGTGATGGGCGTGGTGGTGCTGATCATCGTGCTGGCCATCATGCTGCCGATACTGAATATGAGTAAT
CTCGTGGGATGA

Protein sequence :
MPAYEYKALDSRGKQKQGVVEADAPRAVRQQLRERGLTPLAVEPAAEKQTRSNPLSSRGSLAAADLALVTRQLATLIQSG
IPIEQALSAAAQQSPKPRIRSMLIAIRAKVMEGYTLADSLGEFPRAFPRLYRSTVAAGEHAGHLDLVLNRLADYTENRQE
ARQKIQLAAIYPIILSIVAIAIVVFLLTYVVPDIIDVFLKQGQELPTLTMAMLAVSEFLADYGVYLFILLVAALMVFRFF
LTKPGFRLRFHKRLLHLPLFSGMVRGVNTARYASTLSILTTSGVPLVEAMRIAGEVLSNDFLRQELRDAARKVSEGGSLH
RSLDQTGYFPPMMLHMIASGEASGELDSMLERTARMQENTLQSKIAAIVGLFEPMMLLVMGVVVLIIVLAIMLPILNMSN
LVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 5e-56 46
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-56 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_1603 YP_005885295.1 general secretion pathway protein F VFG0181 Protein 7e-88 59
HP15_1603 YP_005885295.1 general secretion pathway protein F VFG2049 Protein 7e-57 46
HP15_1603 YP_005885295.1 general secretion pathway protein F VFG1870 Protein 9e-67 44