Gene Information

Name : HP15_1602 (HP15_1602)
Accession : YP_005885294.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1698876 - 1700384 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
TTGACCACAGACACTGAACTTCAGCCGCAGGATGCTCCGCTGGGCCGTCTTCCGTTTACTTTTGCCAAGCGCAACGGAGT
AATCCTGACCCGTTCGGACTCCGGCGAGCCCGTTATTCTGGTGCGGCCCGGTGCGTCCCATTCTGCGCTGGCGGAAGCGA
ACCGTATCAGTGGCGGTCGTGCCCGTTTTGCCACCATTGATCCGGACCGTTTCGACCAGGCCCTGAATTCCGCCTATCAG
AACGACTCTGCGGAAGCGATGCAGATGGTGGAGGGCATCGGCGATGACATGGACCTGGCCTCCCTCGCTGACTCCGTGCC
GGAAACCGAGGATCTGCTGGAGCAGGAAGACGATGCTCCAATCATCCGTCTGATCAATGCCATTCTCACTGAAGCAGTGA
AAACCAGCGCCTCGGACGTTCACATTGAAACCTATGAAAAGCGCCTTGTGGTTCGCTTCCGGGTGGATGGTGTGTTGCGC
GAAGTGGTAGAGCCCAAGCGCGCACTGGCCCCGCTGCTGGTGTCCCGGATCAAGGTCATGGCGAAGCTGGATATTGCCGA
GAAGCGGGTGCCCCAGGATGGCCGTATTGCGCTGAGGGTCGCTGGTCGGGAAGTTGATATTCGTGTGTCGACCATGCCGT
CTTCAAGCGGTGAACGCGTGGTTCTGCGTTTGCTCGACAAACAGGCAGGTGCCATACGGCTGGAATCCCTGGGCATGGCG
GGGCAGGACCTGAAGGTTCTGCGCAAGCTGATTTACCGGCCTTATGGCATTTTGCTGGTCACTGGCCCGACGGGTTCCGG
TAAGTCCACCACGCTCTATGCCTCGCTCCAGGAAATTAACGACCGTAGCCGCAACATCCTGACTGTTGAAGACCCCATCG
AGTATAACCTGCCCGGCATCGGCCAGACCCAGGTGAATACCAAGGTGGCCATGACCTTTGCCCGGGGTCTTCGTGCCATT
CTGCGTCAGGACCCAGACGTGGTTATGATCGGTGAGATCCGGGATCTGGAAACGGCAGAAATTGCCGTACAGGCGAGTCT
GACGGGCCACCTGGTCCTCTCCACGTTGCACACCAACACTGCCGTTGGCGCGATTACCCGGCTTATGGATATGGGTATTG
AGCCCTTCCTGATTTCATCAAGCCTGGTGGGCATTGTTGCCCAACGGCTGGTTCGGGTTCTGTGCAAGGAATGCCGGGAG
CCGTATACACCTACAGAAGAGCACTGCGAGTTTCTGCAGCAGGATCCCGCCAACCCGCCCACCATTTACCGGGCAACCGG
CTGTAGCCATTGCAACCAGCTCGGTTACCGTGGGCGTATTGGTATCTATGAGGTGGTGGAGATCTCCGAGGAAATCAGTT
CTCTGATCCACAAACGTGCCGGTGAGCTGGACCTGGAAAAGGTGGCTCGCCAGCATGGGCCCAGTATTCACGCAGACGGC
GTGCAGAAAATCCTGGATGGTGTGACCACGGTGGAAGAAGTACTCCGCGTTACGCACCGGGGTCAGTAA

Protein sequence :
MTTDTELQPQDAPLGRLPFTFAKRNGVILTRSDSGEPVILVRPGASHSALAEANRISGGRARFATIDPDRFDQALNSAYQ
NDSAEAMQMVEGIGDDMDLASLADSVPETEDLLEQEDDAPIIRLINAILTEAVKTSASDVHIETYEKRLVVRFRVDGVLR
EVVEPKRALAPLLVSRIKVMAKLDIAEKRVPQDGRIALRVAGREVDIRVSTMPSSSGERVVLRLLDKQAGAIRLESLGMA
GQDLKVLRKLIYRPYGILLVTGPTGSGKSTTLYASLQEINDRSRNILTVEDPIEYNLPGIGQTQVNTKVAMTFARGLRAI
LRQDPDVVMIGEIRDLETAEIAVQASLTGHLVLSTLHTNTAVGAITRLMDMGIEPFLISSSLVGIVAQRLVRVLCKECRE
PYTPTEEHCEFLQQDPANPPTIYRATGCSHCNQLGYRGRIGIYEVVEISEEISSLIHKRAGELDLEKVARQHGPSIHADG
VQKILDGVTTVEEVLRVTHRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-140 61
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-140 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_1602 YP_005885294.1 type II secretion system protein E VFG0182 Protein 1e-156 68
HP15_1602 YP_005885294.1 type II secretion system protein E VFG2048 Protein 9e-141 61
HP15_1602 YP_005885294.1 type II secretion system protein E VFG1876 Protein 1e-133 56
HP15_1602 YP_005885294.1 type II secretion system protein E VFG2426 Protein 2e-73 46
HP15_1602 YP_005885294.1 type II secretion system protein E VFG1880 Protein 3e-83 42