Gene Information

Name : HP15_1578 (HP15_1578)
Accession : YP_005885270.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Virulence
Product : type I restriction-modification system, methyltransferase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1663308 - 1665731 bp
Length : 2424 bp
Strand : +
Note : -

DNA sequence :
ATGGATCACAGCGCACACAACAAACTTGTCTCCTTTATATGGAACATCGCCGACGACTGCCTGCGCGATGTGTATGTGCG
GGGTAAATACCGCGATGTCATCCTGCCCATGGTAGTGCTGCGCCGTCTCGATACCCTGCTCATGCCGACTAAGGAGGCGG
TGCTGGAAGAGGTGCGCTTCCAGAAAGAGGAAATGGACGCCACCGAGCTGGACCCGGCCCCGCTGAAGGCCGCATCCGGC
TATGTGTTCTACAACGTCTCCAAGTGGACGCTCACCAGCCTGTACAACACCGCCACCAATAACCGGCAGATCCTGCTGGC
CAACTTCGAGGAATACCTGAAGGGCTTCAGTCCCAACGTACAGGAAATCATCGAGTGCTTTGAGCTGAAGAGCAAAATCC
AGCACATGGCCCACAAGGACGTGCTGCTGGATGTGGTGGAAAAATTCGTCTCGCCCAAAATTAACCTTACGCCCAAAGAT
GCTCTGGACCCGGACGGCTACAAGCTCCCCGGCCTCTCCAACCTGGGCATGGGCTATGTGTTTGAAGAGCTGATCCGCAA
GTTCAACGAAGAAAACAACGAAGAGGCGGGGGAGCACTTTACCCCGCGGGAAGTGATCGAACTGATGACCCACCTGGTGT
TCGATCCCATCAAGGACGACCTGCCGCTCACCCTGACCGTGTACGACCCGGCCTGCGGCAGCGGCGGCATGCTCACTGAA
TCCCAGAACTTCATTGAAGAGAAGTATCCCTCCGACAATCGGGATATCTACCTCTACGGCAAGGAAATCAACGACGAAAC
CTACGCCATCTGTAAATCCGACATGATGATCAAGGGCAACAACCCGGAAAACATCAAGGTCGGCTCCACCCTGTCCACCG
ATGAATTCGCCTCCGATCGTTTCGACTTCATGCTCTCCAACCCGCCCTACGGCAAAAGCTGGGCATCGGAGCAGAAGCAC
ATCAAGGACGGCAGCGACGTCATCGACCCGCGCTTCAAGATCCAGCTCAAGGACTACTGGGGCAATGAAGAGGACTGCGA
CGCCACGCCGCGCTCCAGCGATGGCCAGTTGCTGTTCCTCATGGAAATGGTCAGCAAGATGAAAGACCCGGCCACGGGCT
CAAAAGGCAGTCGCATTGCCTCGGTCCACAACGGCTCCAGCCTGTTCACCGGCGATGCCGGCGGAGGCGAAAGCAATATC
CGCCGCTACCTGATCGAGAACGACTGGCTGGAGGCCATCGTCCAGCTACCCAACAACCTGTTCTACAACACCGGCATCAC
CACCTATATCTGGGTGCTGAACAACAACAAACCGGCAAACCGGCGTGGCAAGGTACAGCTGATCGATGCCAGCCTGCTGT
ACCGCAAGCTGCGCAAGAACCTGGGCAACAAAAACTGCGAATTCGCCCCCGACCATATCGAGCAAATCACCCGCACTTAC
CTGGACTGTACCGCCATCGAGCGGGAGCTGGACGCCAACAACGATCCCGTCGGCATCGCCAGCCAGGTGTTCCGCAACGA
AGACTTCGGCTACCACAAGGTCACCATCGAACGCCCGGACCGCCGCAAGGCCCAGTTCTCCGAAGAGCGCATCGCCGGCC
TGCGCTTCGACAAACAGATCAGCGAGGTCATGGAACATCTCTACGCCGAACACGGCGACAAGGTCTACGACAGCACCGGC
CATGGCAAAGACAATAAGCAGAGCTTCCTGAAAAGCATCGAAAAGCCGGTCATGGCCTGGTGTGACGACAACGACATCAG
CCTAAACACCAAAGCCAAAACCAAACTGCTGGACGTGAAGCGCTGGGCCAGTCTCAAGGCGATCTATGAAACTGCCCGCG
AACTGATGGCCGCCATCGGCCAGGACGAGTTCGACGACTTCAACCAGTTTAAAAAGCAGGTGGATACCGAACTCAAGGCC
AGAAAGCTCAAGCTTTCTGCTACCGAAAAGAACGCCATTCTTAATGCGATAAGCTGGTACGACGAAACCGCCGAAAAAGT
GGTCAAGAAAGTGGTCAAGCTCAATGGCGACAAGCTGGACGAGCTGCTACACCGCTACGACTGCAGCGCTGAGCAGCTAC
CGGACTACGGCCTCTATCCCACCGGCAAGGCCAACGAATACATCACTTTTGAGTCCAGCTCAGACCTGCGCGATAGCGAA
TCCATTGCCCTATTGAAAGACGGGGAAAAGCAGGGCATTCACGGTTACTTCCTGGCAGAAGTGAAACCCCACGTGGAGGA
GGCGTGGATCAACCTGGATTCCACCAAGATCGGCTACGAAATCAGCTTCAACAAATACTTCTACCGCCACAAACCGCTGC
GCTCACTGGAAGAGGTGGCCCAGGACATTATCAGTCTGGAGCAGAAAGCTGAGGGGCTGATTGCACAGATCCTGGGTGTG
GATGTTGAGCAGGTTCAGGGGTAG

Protein sequence :
MDHSAHNKLVSFIWNIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLMPTKEAVLEEVRFQKEEMDATELDPAPLKAASG
YVFYNVSKWTLTSLYNTATNNRQILLANFEEYLKGFSPNVQEIIECFELKSKIQHMAHKDVLLDVVEKFVSPKINLTPKD
ALDPDGYKLPGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDDLPLTLTVYDPACGSGGMLTE
SQNFIEEKYPSDNRDIYLYGKEINDETYAICKSDMMIKGNNPENIKVGSTLSTDEFASDRFDFMLSNPPYGKSWASEQKH
IKDGSDVIDPRFKIQLKDYWGNEEDCDATPRSSDGQLLFLMEMVSKMKDPATGSKGSRIASVHNGSSLFTGDAGGGESNI
RRYLIENDWLEAIVQLPNNLFYNTGITTYIWVLNNNKPANRRGKVQLIDASLLYRKLRKNLGNKNCEFAPDHIEQITRTY
LDCTAIERELDANNDPVGIASQVFRNEDFGYHKVTIERPDRRKAQFSEERIAGLRFDKQISEVMEHLYAEHGDKVYDSTG
HGKDNKQSFLKSIEKPVMAWCDDNDISLNTKAKTKLLDVKRWASLKAIYETARELMAAIGQDEFDDFNQFKKQVDTELKA
RKLKLSATEKNAILNAISWYDETAEKVVKKVVKLNGDKLDELLHRYDCSAEQLPDYGLYPTGKANEYITFESSSDLRDSE
SIALLKDGEKQGIHGYFLAEVKPHVEEAWINLDSTKIGYEISFNKYFYRHKPLRSLEEVAQDIISLEQKAEGLIAQILGV
DVEQVQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 75
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 75
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_1578 YP_005885270.1 type I restriction-modification system, methyltransferase subunit VFG1102 Protein 0.0 75