Gene Information

Name : HP15_123 (HP15_123)
Accession : YP_005883815.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Unknown
Product : transposase OrfAB subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 131940 - 132773 bp
Length : 834 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGTTGAAATGGTCTGCAATGCGTTTGATATACGCCGTTCCAGCTATTACGAGTACCGCCAACGGCGGAAGCACGT
GGATGTTGAGCGTCTGGCCCTAAAGGCTCAGGTAAACCGCCTATTTACCAAGAGCCGCAGCTCTGCCGGCAGTAGAACGA
TCAAGGGCATGCTCAATGACGACGGCGTTGTCATCGGGCGCTTCAAGGTTCGACGATTGATGAGTGAGCTGGGGCTGATC
TGTAAGCAGCCGGGTCCTCACGCCTACAAGCAGGCGACCGTTGAGCGACCGGATATCCCGAACCATCTGGCTCGTGAGTT
TACGGTAGACCGGCCGAATCAGGCGTGGTGTGGTGACATCACCTACGTATGGAGCGGCCAGCGGTGGAGTTATCTGGCTG
TCGTTCTGGATTTATATGCCCGACGCGTCGTTGGTTGGGCGATGTCATCCAGCCCCGATGCCGATTTGGTGGTCAAAGCT
CTAGACCACTCCTGGGAACAGCGTGGTCAACCAGAAAAAGTCATGTTCCACTCGGATCAGGGAAGCCAGTATGCCAGTCG
AAAGTTCCGTCAGCGGCTCTGGCGCTATCGAATGACACAAAGCATGAGCCGACGTGGCAACTGCTGGGACAACGCACCGA
TGGAGAGGCTGTTCCGGAGTCTGAAATCTGAATGGATACCGGCCCTGGGATATCGAAATCTGCCTGAGGCCAAAAAAGAT
GTTGGTGGCTATCTGATGGACTACTACAACCAGCAAAGACCTCATACGTTCAACGGCGGCATTTCTCCCGTTGCAGCAGA
GGAAAACCTTAAAATACTGTCCGGGATTAGTTGA

Protein sequence :
MPVEMVCNAFDIRRSSYYEYRQRRKHVDVERLALKAQVNRLFTKSRSSAGSRTIKGMLNDDGVVIGRFKVRRLMSELGLI
CKQPGPHAYKQATVERPDIPNHLAREFTVDRPNQAWCGDITYVWSGQRWSYLAVVLDLYARRVVGWAMSSSPDADLVVKA
LDHSWEQRGQPEKVMFHSDQGSQYASRKFRQRLWRYRMTQSMSRRGNCWDNAPMERLFRSLKSEWIPALGYRNLPEAKKD
VGGYLMDYYNQQRPHTFNGGISPVAAEENLKILSGIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-83 67
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 3e-64 59
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 3e-64 59
unnamed CAI43898.1 putative transposase Not tested LEE Protein 8e-62 53
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 8e-62 53
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-62 53
Z5089 NP_290241.1 transposase Not tested LEE Protein 3e-62 53
unnamed AAC31485.1 L0006 Not tested LEE Protein 7e-60 53
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 9e-60 53
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-65 53
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-69 50
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-69 50
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-69 50
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-69 50
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-69 50
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-69 50
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-69 50
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-69 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_123 YP_005883815.1 transposase OrfAB subunit B VFG1484 Protein 2e-64 59
HP15_123 YP_005883815.1 transposase OrfAB subunit B VFG0785 Protein 1e-62 53
HP15_123 YP_005883815.1 transposase OrfAB subunit B VFG1122 Protein 7e-70 50