Gene Information

Name : HP15_121 (HP15_121)
Accession : YP_005883813.1
Strain : Marinobacter adhaerens HP15
Genome accession: NC_017506
Putative virulence/resistance : Unknown
Product : transposase, OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 130373 - 130678 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence :
ATGACCAGAAAGCGACGTTCTTTTTCTCCGGAGTTCAAACAGGAAGCAGCCAGCCTGGTGCTGGATCAAGGTTACACGAT
TCCCCAGACGAGCGTGTCCCTGGGAATTGGTGAAAGCGCTATCCGGCGCTGGGTTAACCAACTGACCGAGGAGCGTGACG
GTGTCACCCCGAAGGGCAAGGCGTTAACCCCGGAGCAGCGCCGTATTCAGGAGCTGGAAGCCCGCTGCAAGCGCCTTGAG
CAGGAGAAAGACATACTAAAAAAGGCTACTATGAGTTCAACCGGTCAACGCAAATATACTTTGTAG

Protein sequence :
MTRKRRSFSPEFKQEAASLVLDQGYTIPQTSVSLGIGESAIRRWVNQLTEERDGVTPKGKALTPEQRRIQELEARCKRLE
QEKDILKKATMSSTGQRKYTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 7e-26 68
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-19 53
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-19 53
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-19 53
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 5e-19 53
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-19 53
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 5e-19 53
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-19 53
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-19 53
l7045 CAD33744.1 - Not tested PAI I 536 Protein 1e-18 52
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 1e-18 52
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 52
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-18 51
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 4e-18 50
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 4e-17 46
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 2e-18 46
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 1e-18 46
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-16 45
tnpA CAB61575.1 transposase A Not tested HPI Protein 1e-16 45
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 3e-18 44
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 4e-18 44
unnamed AAC31483.1 L0004 Not tested LEE Protein 2e-18 44
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 4e-18 44
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HP15_121 YP_005883813.1 transposase, OrfA VFG1123 Protein 1e-19 53
HP15_121 YP_005883813.1 transposase, OrfA VFG1485 Protein 5e-19 52
HP15_121 YP_005883813.1 transposase, OrfA VFG1553 Protein 7e-17 52
HP15_121 YP_005883813.1 transposase, OrfA VFG0784 Protein 1e-18 44
HP15_121 YP_005883813.1 transposase, OrfA VFG1566 Protein 8e-13 42