Gene Information

Name : NMBB_0086 (NMBB_0086)
Accession : YP_005881752.1
Strain : Neisseria meningitidis alpha710
Genome accession: NC_017505
Putative virulence/resistance : Virulence
Product : capsule polysaccharide modification protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 87765 - 89813 bp
Length : 2049 bp
Strand : +
Note : -

DNA sequence :
GTGATTCCTGCCTACATTCCTCTTCGCTCTTTCGGTATACGTAAAATTCCGAATATTACGCAATTTCTACCGGAATATTC
ACTTAACAAAACCGTATTCAACGCCCAAACCATCATTGGCTGGGGCTTACGCCCGACCACCCACCAAGCACGTGCTTTTG
CACAATCACATGGCTTGCCGTTTGTAGCCTTGGAAGACGGTTTTTTACGCTCACTGGGCTTAGGCGTGGCCGGTTATCCG
CCCTTCGCACTGGTTTACGACGATATCGGCATCTATTACGACACAACCCGCCCATCGCGTTTGGAGCAGTTGATTTTAGC
CGCAAACATGCCGTCTGAAATGCTTAACCAAGCGCAGCAGGCCATTGATTTGATTTTGACGCACCGTTTGTCTAAATATA
ACCATGCTCTGGATTTTTCAGACGGCCTCGTACAAGACAGCAAAAACATTGTTTTGGTAATTGATCAAACTTTCGGCGAT
ATGGCGATTCAATATGGCGGCGCAGATGAAGCCACATTCCGCCAAATGTTTCAGACGGCCTTAGCCGAAAATCCTGATGC
GGAAATCTGGGTCAAAACCCATCCCGATGTATTGAGCGGCAAGAAACAGGGTTACCTTACTGATTTGGCACAGCAGCCGC
GTGTGCGTTTATTGGCTGAAGACATTAATCCGATTTCGCTGCTGCAAGCGGTGGACAAAGTGTATTGCGTGACCTCGCAA
ATGGGTTTTGAAGCCTTGTTGTGCGGCAAGCCTTTGGTAACGTTTGGTTTGCCGTGGTATGCCGGATGGGGCGTGAGTGA
CGACCGCCATCCTAAAATCGACAGCCTTGTTCAAACCCAACGCCGCGCCCCCCGCAACTTGCTGCAGCTCTTCGCTGCAG
CCTATCTGCAATACAGCCGCTACCTCAACCCCAATACCGGCGAAGCAGGCAGCCTCTTTGATGTCATCGACTATCTGGCG
ACGGTCAAACGCAAAAACGACAAATTGCGTGGCGAGTTGTATTGCGTTGGTATGTCTTTGTGGAAACGCGCGGTTGCCAA
ACCGTTCTTTAACGTACCCTCTTGCCGTCTGAAATTTATCTCTTCCACCCAAAAACTGGCAGGGGTCAAACTGTCCGACG
ATGCACGCATCCTTGCCTGGGGCAACGGCAAAGAGGCCATCGTCCGCTTTGCCGAACAACACCACATCCCCCTGCTGCGC
ATGGAAGACGGCTTTATCCGCTCGGTCGGACTCGGCTCCAACTTAGTGCCGCCGCTGTCGCTCGTTACCGACGATATGAG
CATTTATTTCAATGCCGAAACCCCGTCCCGTCTTGAATACATCCTACAAAACCAAAACTTCGACGATCAAGACTTTCAGA
CGGCCTTGAAGCTGCAAAAAATGCTGACCGAAAACCACATCAGTAAATACAACGTCGGCAGCTCAGACTTCACCGCCCCG
TCAACCGACAAAACCGTGATCCTCGTTCCCGGCCAGGTTGAAGATGATGCGTCTATCCGCTACGGTTCGCCCCAAATCTA
CCGCAATCTGGATTTGCTCCGTACCGTACGCGAACGAAACCCCAATGCCTATATCATCTACAAACCGCATCCCGATGTAG
TCAGCGGTAACCGCATCGGCCATATTTCCCCTGAAGATGCTGCACGATATGCCGACCAAACCGCCGAGCAAACCGACATC
CTGACCTGTCTCCAATACGCAGACGAAGTACATACCATGACTTCGCTGACCGGTTTTGAAGCCTTGTTGCGCGGCAAAAA
AGTCAGCTGCTACGGCCTGCCTTTTTACGCAGGCTGGGGACTTACCCAAGATCTGCTCCCCATTCCGCGCCGTAGCCGCA
GACTTGAGCTTTGGCAGCTGATTGCCGGCACGCTCATACACTATCCCGACTATATCCATCCCGAAACCCATCAGGCCATC
AATGCGGAAACCGCTGCCCAAATCCTGATACGACAAAAAAATATGCAAAAAAACAACAACGGATTACATCGCGGGTACTT
TGCCAAAAAATTAGGTAAAATCAAACAACTATATCGATCTTTCAAATAA

Protein sequence :
MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLRPTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYP
PFALVYDDIGIYYDTTRPSRLEQLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLLAEDINPISLLQAVDKVYCVTSQ
MGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLA
TVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAEQHHIPLLR
MEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQDFQTALKLQKMLTENHISKYNVGSSDFTAP
STDKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDI
LTCLQYADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAI
NAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipA NP_273145.1 capsule polysaccharide modification protein Not tested IHT-A Protein 0.0 90
kpsC YP_854335.1 capsule polysaccharide export protein KpsC Not tested PAI I APEC-O1 Protein 2e-136 49
kpsC AAZ04470.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 2e-136 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NMBB_0086 YP_005881752.1 capsule polysaccharide modification protein VFG0259 Protein 0.0 90
NMBB_0086 YP_005881752.1 capsule polysaccharide modification protein VFG0704 Protein 2e-161 59
NMBB_0086 YP_005881752.1 capsule polysaccharide modification protein VFG0692 Protein 0.0 58