Gene Information

Name : ssb (NMV_0926)
Accession : YP_005878333.1
Strain : Neisseria meningitidis 8013
Genome accession: NC_017501
Putative virulence/resistance : Virulence
Product : single-stranded binding protein (SSB; helix-destabilizing protein)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 921076 - 921600 bp
Length : 525 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type f : factor

DNA sequence : 
ATGTCATTGAACAAAGTTATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCGGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAACGTGTAGAGCGTACTGAGTGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGTACCGCTTACGATATTGTCGCCAACGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGAGGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCGC
AGCAAAGCCGGCAGCCCGCCTCCGACGCGCCGTCCCATCCCCAAGAAGCACCAGCCGCGCCGCGCCTCCAACCCGTGCCT
GCCGCCGCCCCGGTCGAGGACATTGACGACGATATCCCGTTCTGA

Protein sequence : 
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRLQPVP
AAAPVEDIDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-28 45
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-28 45
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-28 45
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-26 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_005878333.1 single-stranded binding protein (SSB; helix-destabilizing protein) VFG0576 Protein 2e-26 44