Gene Information

Name : ctrD (NMV_0075)
Accession : YP_005877672.1
Strain : Neisseria meningitidis 8013
Genome accession: NC_017501
Putative virulence/resistance : Virulence
Product : polysialic acid capsule export ATP-binding protein CtrD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 81618 - 82268 bp
Length : 651 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 2493648; Product type t : transporter

DNA sequence : 
ATGATTTCAGTTGAACACGTTTCCAAACGCTATCTGACCCGCCAAGGTTGGCGGACAGTCTTGCACGATATTAGCTTCAA
AATGGAGAAGGGCGAGAAAATCGGTATTCTCGGCCGCAACGGTGCAGGTAAATCGACGCTCATCCGTTTGATCAGTGGCG
TTGAGCCGCCGACCACGGGTGAAATCAAGCGGACAATGAGTATTTCTTGGCCTTTGGCATTCTCCGGTGCGTTTCAAGGC
AGTCTGACCGGTATGGACAATTTGCGTTTCATCTGCCGGATTTACAATGTCGATATCGATTATGTGAAGAACTTTACCGA
AGAGTTTTCCGAGTTGGGGCAATATCTTTACGAGCCGGTCAAGCGTTATTCTTCAGGTATGAAGGCGCGTTTGGCATTTG
CTTTGTCGTTGGCGGTAGAGTTTGATTGCTATCTGATTGACGAAGTGATTGCAGTTGGCGACTCGCGCTTTGCCGATAAA
TGTAAGTACGAGTTGTTTGAAAAGCGCAAAGACCGTTCCATCATCTTGGTGTCGCACAGCCACAGCGCCATGAAGCAATA
TTGCGATAATGCGATGGTGCTGGAAAAAGGGCATATGTACCAGTTTGAAGATATGGACAAAGCCTACGAATATTATAATT
CGCTGCCTTAA

Protein sequence : 
MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGKSTLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQG
SLTGMDNLRFICRIYNVDIDYVKNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-100 99
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 6e-44 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrD YP_005877672.1 polysialic acid capsule export ATP-binding protein CtrD VFG0258 Protein 2e-100 99
ctrD YP_005877672.1 polysialic acid capsule export ATP-binding protein CtrD VFG0696 Protein 9e-86 82
ctrD YP_005877672.1 polysialic acid capsule export ATP-binding protein CtrD VFG2563 Protein 3e-63 59
ctrD YP_005877672.1 polysialic acid capsule export ATP-binding protein CtrD VFG1449 Protein 2e-44 48