Gene Information

Name : ctrC (NMV_0074)
Accession : YP_005877671.1
Strain : Neisseria meningitidis 8013
Genome accession: NC_017501
Putative virulence/resistance : Virulence
Product : polysialic acid capsule export inner-membrane protein CtrC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 80824 - 81621 bp
Length : 798 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 2493648; Product type t : transporter

DNA sequence : 
ATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTGTTGATGCGGGA
AATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATTCGTTATCG
TCTTGATGTGGAAATTTTTAAGGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCTATCCGATG
TTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCACCGCAATGT
AAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGATTATGGCGG
TATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGGCTTTTTTT
GCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACATTGACTTT
TGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATTAATGATTC
CGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTTGGTATATC
GTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCGCAATGA

Protein sequence : 
MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPM
LMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYI
VLCNLVLLLFGLAMVSKFSKGVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-115 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC YP_005877671.1 polysialic acid capsule export inner-membrane protein CtrC VFG0257 Protein 2e-115 100
ctrC YP_005877671.1 polysialic acid capsule export inner-membrane protein CtrC VFG0685 Protein 6e-85 71
ctrC YP_005877671.1 polysialic acid capsule export inner-membrane protein CtrC VFG0697 Protein 6e-85 71
ctrC YP_005877671.1 polysialic acid capsule export inner-membrane protein CtrC VFG2564 Protein 1e-44 45