Gene Information

Name : llh_1920 (llh_1920)
Accession : YP_005874983.1
Strain : Lactococcus lactis A76
Genome accession: NC_017492
Putative virulence/resistance : Virulence
Product : Ferrichrome transport ATP-binding protein FhuC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 365473 - 366201 bp
Length : 729 bp
Strand : +
Note : TC 3.A.1.14.3

DNA sequence : 
TTGAAAAACGTAACGCTGTCGATTGAAAAAGGAAAAACGACAGCTATTATTGGAGTCAATGGTTCTGGAAAATCAACGAT
ATTAAAAGCCCTAGGGCGCTTGATTAAAGCAGAAGGTCAGGTTATTTTTGATAATCAGCCCTTAAGCAATCATTCAAATC
GGGAGATTGCTCGCATTTTAGCCCTATTGCCTCAATCAATTACTGCTCCCGCAGATATTACAGTCTATGAGCTTGTTAGT
CTAGGACGTTTCCCACATCAAAAACTGATGCAACAACGTTTATCAAAAGAAGATATTACTTTTATTGAGGAATTAATGAG
GGAAACAAATGTTTGGGATATTCGTGAAAGTAAAGTATCAGAACTTTCTGGTGGGCAAAAACAAAGAGTATTTATCACAA
TGATTTTAGCCCAAGATAGTGAGATTATTTTACTAGATGAACCCACAACATATTTGGATTTAGCTCATCAGTTGGATATT
TTGTGTCTGCTTAAAGATTTAGCGACAAAGCGAAATAAAACCATTGTTTACGTTATTCATGACTTGAACCATGCCGCTCG
TTTTGCCGACAACCTAGTTCTCGTCAAAAATGGGAAAGTGGTCGAGCAAGGGACTGTTGATGACTTATTTACTCAAAAAA
CATTGAAAGAATGCTTTGGATTGGACGTTACTTTAGGATGTGATACCTTTACCAAAAAATTAATGATTACTGGGGTGAAA
GATGCCTAA

Protein sequence : 
MKNVTLSIEKGKTTAIIGVNGSGKSTILKALGRLIKAEGQVIFDNQPLSNHSNREIARILALLPQSITAPADITVYELVS
LGRFPHQKLMQQRLSKEDITFIEELMRETNVWDIRESKVSELSGGQKQRVFITMILAQDSEIILLDEPTTYLDLAHQLDI
LCLLKDLATKRNKTIVYVIHDLNHAARFADNLVLVKNGKVVEQGTVDDLFTQKTLKECFGLDVTLGCDTFTKKLMITGVK
DA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-39 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-39 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-39 46
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-39 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-42 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-42 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-39 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llh_1920 YP_005874983.1 Ferrichrome transport ATP-binding protein FhuC BAC0164 Protein 8e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llh_1920 YP_005874983.1 Ferrichrome transport ATP-binding protein FhuC VFG0925 Protein 8e-42 45
llh_1920 YP_005874983.1 Ferrichrome transport ATP-binding protein FhuC VFG1042 Protein 7e-42 43