Gene Information

Name : llh_7210 (llh_7210)
Accession : YP_005876041.1
Strain : Lactococcus lactis A76
Genome accession: NC_017492
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter substrate-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1340359 - 1341306 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence :
ATGCTAAATAAACATAAGAAGTTTCTACTTGCTTTTGTGCTAATTATGACAGCTATTTCCTTAGTGGCTTGTTCTAAAAA
TACAAATCAGTCTATAAAAAAAGCGGATGACAAATTAAATGTAGTGGTCACTAATTCTATACTGGCAGACATGACTAAAA
ATATTGCCAAAGATAAAATTAATTTGCACAGTATCGTTCCTGTCGGGAAAGACACCCATGAATATGAACCTTTGTCAGAT
GATGTTCAAAAAACTTCTAGAGCTGATTTAATTTTCTATAATGGAATAAACTTGGAGACTGGCGGAAATGCTTGGTTTAC
AAAATTAGTCAAAAATGCAAATAAAAAAGAAAATGTAGACTACTTTCCAGTCAGTAGAGGGGTTGATATCATCTATCTTG
AAGGAAAGAGCACTGAGGGAAAAGAAGATCCACACGCCTGGCTTAATTTAGAAAATGGGATAATCTATGCCCAAAACATT
GAAAAAGAATTATCAAAAAAAGATCCTGACCAGAAAGATTTTTATCAAAACAACTTGAATAAGTATATAAACAAACTAAC
TAAGCTAGATAAGGAAGCTAAAGCAAAATTTGCTTCAATTCCAGAAAATAAAAAAATGATTGTGACAAGCGAAGGCTGCT
TCAAATATTTTTCTAAAGCTTATGATATCTCTTCTGCTTATATTTGGGAAATTAATACCGAAGAAGAAGGAAGCCCAGAA
CAAATAAAAACGTTAGTGAGAAAACTAAGAGCCACAGAGCTTGCATCTTTGTTTGTAGAGAGTAGCGTCGATAGTCGGCC
GATGAAAACAGTATCTAAGGATACGAAAATCCCAACTTACTCAACAATCTTTACAGACTCAGTAGCAAAAAGTGGGGAGA
ATGGGGATAGTTATTATCGTATGATGGAATGGAATATAAACAAAATCTATGACGGACTTTCAAAATAA

Protein sequence :
MLNKHKKFLLAFVLIMTAISLVACSKNTNQSIKKADDKLNVVVTNSILADMTKNIAKDKINLHSIVPVGKDTHEYEPLSD
DVQKTSRADLIFYNGINLETGGNAWFTKLVKNANKKENVDYFPVSRGVDIIYLEGKSTEGKEDPHAWLNLENGIIYAQNI
EKELSKKDPDQKDFYQNNLNKYINKLTKLDKEAKAKFASIPENKKMIVTSEGCFKYFSKAYDISSAYIWEINTEEEGSPE
QIKTLVRKLRATELASLFVESSVDSRPMKTVSKDTKIPTYSTIFTDSVAKSGENGDSYYRMMEWNINKIYDGLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-107 72
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-107 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llh_7210 YP_005876041.1 Manganese ABC transporter substrate-binding protein SitA VFG1359 Protein 1e-102 70
llh_7210 YP_005876041.1 Manganese ABC transporter substrate-binding protein SitA VFG2165 Protein 4e-86 56
llh_7210 YP_005876041.1 Manganese ABC transporter substrate-binding protein SitA VFG2157 Protein 1e-78 53