Gene Information

Name : llh_5570 (llh_5570)
Accession : YP_005875713.1
Strain : Lactococcus lactis A76
Genome accession: NC_017492
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1040484 - 1041026 bp
Length : 543 bp
Strand : +
Note : -

DNA sequence :
ATGGGAGACATTTTTATAAGCCCAGCTTATCAAATTAAACGAGTGCCTATCGAGAAGATTAGGGCCAATACTTATAATCC
GAATCGAACAGCACCTCCTGAATTTCGTCTACTGGAACGTTCTATTTTGGAAGATGGCTATACGATGCCTATCGTTTGTT
ATTACGATAAGGAAAAGGATTTTTATGAGATTGTTGATGGATTTCATCGCTATTTGGTCATGAAAAGGTCAGAAGAAATT
GCTCAACGGGAAGGAAATTGCTTACCTGTTTCAATTATAGACCGGCCACTTGAAAATCGAATTGCCAGTACTATTCGTCA
CAATCGAGCTAGAGGAACACATTCAATTGAGTTAATGACAGAAATTGTTCAGCAGTTGGTGGAATCGGGTTTGAGTGATC
AGTGGATTATGAAACACATTGGAATGGACAAAGAAGAGTTGCTTCGCTTGAAACAACTCAGCGGTCTGGCTTCACTTTTT
CAAAATCAAGACTTTTCTCGTTCTTGGACATGGAAGGAAGATGAAGAGATAAGTGAAGAATAG

Protein sequence :
MGDIFISPAYQIKRVPIEKIRANTYNPNRTAPPEFRLLERSILEDGYTMPIVCYYDKEKDFYEIVDGFHRYLVMKRSEEI
AQREGNCLPVSIIDRPLENRIASTIRHNRARGTHSIELMTEIVQQLVESGLSDQWIMKHIGMDKEELLRLKQLSGLASLF
QNQDFSRSWTWKEDEEISEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 5e-51 64
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 3e-40 57
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-40 57
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 7e-28 48
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 3e-26 48
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 3e-26 48
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 6e-28 48
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 6e-26 47
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 6e-26 47
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-26 45
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-14 41
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-14 41
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llh_5570 YP_005875713.1 Co-activator of prophage gene expression IbrB VFG1505 Protein 1e-26 45