Gene Information

Name : LRHK_1017 (LRHK_1017)
Accession : YP_005872659.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Unknown
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 968851 - 969585 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGTCAACTCAAGCAATCGTCCAGGTTTCCGATCTTCAACAGGGTTACGGTACAAAAACGGTGCTTAGCCACATCAATCT
AACATTGAATCGCGGTCAGATTCTCGCTTTGATCGGTCCTAGTGGCGCTGGTAAAACAACTTTGATCAGCACCATTATGG
GGATGATCCGTCCTCGCGCCGGGAAGGTTACCGTTTTTAACCAGCATGTTCCCAATCGCTTATTATTAGGCCGCATTGGT
TTTATGGCGCAAACCGATGCGTTGTACGAAAGCTTAACCGGAGCCGAAAATCTCACTTTTTTTGCCAAAATGCAAGGCGT
TGGCCGTTACTTACTGACCAAACAGTTAATGTATGCTGCTGACGTTGTTGATTTACAAACTGCCCTTAAACAACTCGTCA
AGGATTATTCAGGCGGGATGAAAAGACGTTTATCATTGGCCATCGCTTTAATTGGCAAACCACAATTGTTGATTTTAGAC
GAGCCGACGATTGGCATCGATCCTGCGTTACGTCGCCAAATCTGGCAGGAATTGCATCGACTGGCAAAACAAGGCGTGAC
AATTATTTTAACCACCCATGTGATGGCGGATGCTGAAGAAGCGGATCTGCTCATGATGATTCGCAATGGTCAAGCAATCG
CTCAAGGCACACCGAAGCAGTTGCAAGTTGACTATCAAGCGAATTCGATTGAAGCGGTATTTCTAGCCGCAGGGAGGCAG
CAAGATGCGCATTGA

Protein sequence :
MSTQAIVQVSDLQQGYGTKTVLSHINLTLNRGQILALIGPSGAGKTTLISTIMGMIRPRAGKVTVFNQHVPNRLLLGRIG
FMAQTDALYESLTGAENLTFFAKMQGVGRYLLTKQLMYAADVVDLQTALKQLVKDYSGGMKRRLSLAIALIGKPQLLILD
EPTIGIDPALRRQIWQELHRLAKQGVTIILTTHVMADAEEADLLMMIRNGQAIAQGTPKQLQVDYQANSIEAVFLAAGRQ
QDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 2e-52 46
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 5e-54 46
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 3e-40 46