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Name : treC (LRHK_599) Accession : YP_005872291.1 Strain : Lactobacillus rhamnosus ATCC 8530 Genome accession: NC_017491 Putative virulence/resistance : Unknown Product : alpha, alpha-phosphotrehalase Function : - COG functional category : - COG ID : - EC number : - Position : 588591 - 590246 bp Length : 1656 bp Strand : + Note : - DNA sequence : ATGGCGTTTCATAAGAAAGTTATTTATCAGTTATATCCCAAGTCGTTTTACGATAGCGATGGTGATGGTGTCGGCGACTT ACGCGGCATCATTGAAAAGATCGATTATCTCAAGGCACTGCACATCGATATGATCTGGTTCAACCCATTCTTTGTGTCGC CGCAATATGACAACGGCTATGATGTGGCTGATTATCGGCAAATCGATCCGCGGTTTGGAACGATGGCTGATTTTGAAGAG TTGGCGCAAAAACTTAAAGCTGCCGGGATCGACATCATGTTGGACATGGTGCTCAATCATACCAGCACACAACATGTCTG GTTCCAAAAAGCCTTAGCTGGCGACAAGCACTATCAGGATTATTACTACATTCGACCACCAAAGCCGGATGGCAGCTTGC CGACTAACTGGGAGAGCAAGTTTGGCGGTCCGGCTTGGGCCCCGTTTGGCGACACTGGCAATTATTATTTACATTTATAC GAACGTCGCCAGGCTGATCTCGATTGGCATAATCCAGCCGTCCGTCAAGAAGCAGCCGCTATTATTAATTTTTGGCGCGC CAAAGGGGTTCACGGTTTCCGCTTTGATGTGCTCAACGTCATTGGCAAGGCAAATCAGCTGGTTGATGCGCCACCGGAAG TCGAAAGCAAAACATTATATACGGATACACCGATTGTTCAGGATTATATCAAGGAACTAGCCGCCAACAGTTTTGGCCAG GATCTAAATAGCGTCACGGTAGGCGAAATGAGTTCGACCACCATTAAGAACTCAATCGCCTATACCAAGCCGGAAAATCA CGAGTTATCAATGGTTTTCCAATTTCACCATCTGAAAACGGATTATAAGAACGGTGAAAAGTGGAGCAAAATGCCGTACG ACTTCAAGGCACTGCGCAACATTTTGCACACTTGGGGTCAACAGTTAGATCAAGGCGGCGGCTGGCAAGCGCTTTTCTGG AATAATCACGATCAGCCGCGTGCGCTTAATCGGTTTGGTGATGTTGGCCAATATCGCGTTAAAAGTGCCGAAATGCTAGC TGCTGCGATTCACCTAAGTCGCGGGACGCCATACATCTACATGGGCGAGGAAATCGGCATGACCGATCCGCATTATCATT CGATGGCCGATTATGTCGATGTTGAAGCCAAGAATGCTTATCAGGCACTTTTGAAAGCTGGCAAGTCCGAAAAAGAAGCT TTTGCCATCATTTTGGCCAAGGCTCGGGACAATAGCCGGACGCCAATGCAGTGGGATGACACGGCCAACGCCGGATTTAC CACAGGAACACCGTGGTTGCGGCCAACCAATCAGCGCGAAATTAATGTCAAAGCTGAGCTGGCGCATGGTGAAATTTTCC GATTCTATCAAAAATTGATCGCGTTACGTAAGCAGTATCAAGTGATCAGCAATGGCAGTTATGTGCCTTTTGGGACTGAA ATTGATCGCTTGTACGCTTACGAACGGGTTGCTGGCGATGCCCACTTGCTGGTACTGAATAATTTCAGTGATAAAGCCAT TACGGTACCGCTACCGCCACGTTTCCAGCATGCACGCGTTTTGATAACCAATGAAGCAGATTTAACACCAACTGCAACCA TGACGTTGCCACCATACGCAACGATTGCATTGTTGCAGTCAGATAAGGGGGAATAA Protein sequence : MAFHKKVIYQLYPKSFYDSDGDGVGDLRGIIEKIDYLKALHIDMIWFNPFFVSPQYDNGYDVADYRQIDPRFGTMADFEE LAQKLKAAGIDIMLDMVLNHTSTQHVWFQKALAGDKHYQDYYYIRPPKPDGSLPTNWESKFGGPAWAPFGDTGNYYLHLY ERRQADLDWHNPAVRQEAAAIINFWRAKGVHGFRFDVLNVIGKANQLVDAPPEVESKTLYTDTPIVQDYIKELAANSFGQ DLNSVTVGEMSSTTIKNSIAYTKPENHELSMVFQFHHLKTDYKNGEKWSKMPYDFKALRNILHTWGQQLDQGGGWQALFW NNHDQPRALNRFGDVGQYRVKSAEMLAAAIHLSRGTPYIYMGEEIGMTDPHYHSMADYVDVEAKNAYQALLKAGKSEKEA FAIILAKARDNSRTPMQWDDTANAGFTTGTPWLRPTNQREINVKAELAHGEIFRFYQKLIALRKQYQVISNGSYVPFGTE IDRLYAYERVAGDAHLLVLNNFSDKAITVPLPPRFQHARVLITNEADLTPTATMTLPPYATIALLQSDKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-101 | 42 |
