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Name : LRHK_400 (LRHK_400) Accession : YP_005872100.1 Strain : Lactobacillus rhamnosus ATCC 8530 Genome accession: NC_017491 Putative virulence/resistance : Virulence Product : PTS system sugar-specific permease component family protein Function : - COG functional category : - COG ID : - EC number : - Position : 388885 - 390171 bp Length : 1287 bp Strand : + Note : - DNA sequence : ATGGTTGTGGTTAACTTTATTATCCAAAATATCCTGACGCAGGCCGCCATCACCATTGCGCTCATTGCGATGTTGGGGTT GCTGCTACAACGTAAATCGTTTGGGGCGGTATTAACCGGAACATTTAAGACGCTGTTGGGATTCCAGGTGCTATCAGCAG GATCTGCCATTATTGTCACCGCACTCACGTATTTTGGAAAAATTTTTCAGCATGGCTTTCATTTAAAAGGTGTCGTTCCA AGCATTGAGGCAATTAACGGCCAAGCGATGAACACGCTGGGACTGGGAAATGAAATTGCGCTGACGTTTTTAGGAATCTT CATCGTCAACATTATCATTGCCCGCGTGTCGCCATGGAAGTACATCTTCTTAACGGGTCAGGCACTTTTATGGATGTCGA CAATGACAGTAGTCGGTGGGAAGATGGCCGGATTGAATGCCGTGATGACCATTATTGTCGGCAGTGTTATCGGCGGGATC TTTGCAGTTGCGATGCCCGCGATCGCCCAACCGTTCGTTCGCAAGATTACCAAAGGCGATGCGATTGCGCTTGGGCACTT CTGTACGGTCGGTTACATGGTAGAAGCCGGAGCAGCATGGCTTTTCGGTGAACGCGGCGAAAAGAAGCACTCAATTGAAG ACATCAAACTACCGAAGTACATGGAGTTCTTGCAAGACACTTATCTCTCGGTTGCGGTGGTAATGGTTCCGCTATTCATG ATTACAGCGGCGTTTGCAGGACCTAAGTATGCCGGTAACGGAACAAGCCTGAACTATATCATGAATGCATTTATGATGGG TATCCAATTTGTTGTCGGAGTTTACGTTTTACTAGCCGGCGTGCGGTTGTTATTGGGTGAGATTGTGCCAGCCTTCCGCG GAATTGCGATGAAGTTGGTGCCAAATGCCAAGCCAGCGCTGGATTGCCCGGTACTATTCCCGTTTTCACCTAATGCTGTG ATTCTAGGCTTCATCACCACCACAATTGGAACGGTTATTGGGATGTTCCTGATGCCAGTGTTTGGTCTCGCCGTTATCTT GCCAGGGATGTTAACCAATTTCTTTGCTGGTGGCACGGCCGGAATTTTCGGCAATGTGGTTGGCGGTCGTCGCGGGGCTA TCATCGGCGGCGTCATTCATGGACTTTTCATCACCTTGCTGCCAGCCTTGCTAGTCACTGCACTCACCGCATTCGGTTTT GTCAATGCGTCAGCGACTGACTCTGATACCATCGTTGCGATGTTGATGTATGCATGGATTCTAACGCCAATTCTCAAGGC AGTCTGA Protein sequence : MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARVSPWKYIFLTGQALLWMSTMTVVGGKMAGLNAVMTIIVGSVIGGI FAVAMPAIAQPFVRKITKGDAIALGHFCTVGYMVEAGAAWLFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGVIHGLFITLLPALLVTALTAFGF VNASATDSDTIVAMLMYAWILTPILKAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 4e-58 | 43 |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 6e-58 | 43 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 4e-58 | 43 |
