Gene Information

Name : LRHK_2964 (LRHK_2964)
Accession : YP_005874532.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2883602 - 2884342 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTCAGTATCGAGTTGAAATGAAAAATGTCCACAAGAGCTTCGGCGATAACGATGTGGTCAAAGGCGTTAATTTAAA
CGTTGCAAACAATGAAGTTGTTGTCATGATCGGGGCGTCTGGTGCCGGGAAAAGTACCGTTTTGCGGATGATCAATGGTC
TTGAAACGGTGACAAGCGGCGAGATCTTGATTGACGGTGAAGACATTGCCCATAAAGGAACGAATATCAATAAAGTTCGC
GAAAAAATCGGCATGGTCTTCCAGCATTTTAACCTGTTCCCGAACATGTCGGTCATGGGTAATATTACGTTGGCTCCGAT
TGAACTAGGCATTGCCAGCAAAGAAGAAGCAACCCAACAAGCTAAGGAGATGCTTGAAGTGGTTGGCTTGACCGATAAGG
CAGATGCGATGCCGGCACAGCTTTCCGGTGGCCAACAACAGCGGGTGGCAATTGCCCGGGCATTGGCCATGCATCCGGAT
ATTATGCTGTTCGATGAGCCGACCAGTGCTTTGGATCCGGAAATGGTTGGCGATGTCTTGGGCGTTATGCGCCGACTCGC
TAAACAAGGGATGACGATGGTGATCGTTACCCACGAAATGGGCTTTGCTAAAGAAGTTGCCGATCGGGTGGTCTTCTTTG
ACAACGGTACAATCCTTGAACAAGGGACACCGACAGACATTTTCGAGCATCCAAAAGAGGAGCGTACTAAGAGTTTCTTG
AATAAGGTTTTGAATGCCTGA

Protein sequence : 
MSQYRVEMKNVHKSFGDNDVVKGVNLNVANNEVVVMIGASGAGKSTVLRMINGLETVTSGEILIDGEDIAHKGTNINKVR
EKIGMVFQHFNLFPNMSVMGNITLAPIELGIASKEEATQQAKEMLEVVGLTDKADAMPAQLSGGQQQRVAIARALAMHPD
IMLFDEPTSALDPEMVGDVLGVMRRLAKQGMTMVIVTHEMGFAKEVADRVVFFDNGTILEQGTPTDIFEHPKEERTKSFL
NKVLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-27 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-27 41
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-42 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRHK_2964 YP_005874532.1 ABC transporter family protein NC_012469.1.7686878. Protein 2e-27 42