Gene Information

Name : LRHK_2432 (LRHK_2432)
Accession : YP_005874026.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2383546 - 2384289 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGTTAACAGTCAAGAACCTGACCGTTGCCTACGCTGACACACCGGTGTTTGCTGATGTTGCCGTTCATTTTAACGCAGG
TAAGATCACCGGGATCATTGGGCCTAACGGAGCAGGTAAATCGACCTTGATCAAAGCTATTCTAGGTTTGATCAAGGTTC
AATCAGGGAAGGTCGACTTTTCCGGCCACACCCTCAAGGAAGTGCAACAAGCGATTGCTTATGTCGAGCAGCGCAAGGAT
TTGGATCTGACTTTTCCAATTAACGTGTTAGATCTTGTGCTGACTGGCACCTATGGACGTCTGGGGTTGTTGAAGAGCCC
CGGTAAAAAAGAGCGTCAGGCGGCACTTGAAGCGCTGGAACAAGTCGGGTTGGCGGATTTCACCAAACGCCAGATCAGTC
AGCTATCAGGCGGCCAGCTACAGCGCGTGTTTGTGGCGCGTGCCATTGTGCAGCAGGCTGACATCATGATCCTGGACGAG
CCATTTGTCGGTATTGACATGAAGAGCGAGCAGGAAATCATGGCCATTTTGAATCAGTGGCGCGATGCCGGAAAAACACT
GATTGTCGTTCATCACGATTTAAATAAAGTTTCAAATTATTTTGATGAACTTGTGGTGATGAACCACGGCATTATTGCTG
AAGGACCGGTCGAAGAAGTGTATACGGCTCAAAATATCGAACGGGCATTTTCGGCCGATCTTTCCAACGTGCTGTTTGCA
ACCAAGGAAGGGGCGAGCGTATGA

Protein sequence :
MLTVKNLTVAYADTPVFADVAVHFNAGKITGIIGPNGAGKSTLIKAILGLIKVQSGKVDFSGHTLKEVQQAIAYVEQRKD
LDLTFPINVLDLVLTGTYGRLGLLKSPGKKERQAALEALEQVGLADFTKRQISQLSGGQLQRVFVARAIVQQADIMILDE
PFVGIDMKSEQEIMAILNQWRDAGKTLIVVHHDLNKVSNYFDELVVMNHGIIAEGPVEEVYTAQNIERAFSADLSNVLFA
TKEGASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 6e-48 45
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 4e-48 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRHK_2432 YP_005874026.1 ABC transporter family protein BAC0400 Protein 2e-54 49
LRHK_2432 YP_005874026.1 ABC transporter family protein BAC0440 Protein 7e-47 41