Gene Information

Name : LRHK_2374 (LRHK_2374)
Accession : YP_005873968.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2331274 - 2331942 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTCACTTCAGAATATCAATAAGACATATTTTTTGAAGAAAAAAGGTCGAGGACAACAAGTACTTCGAAATATCAA
TCTGGACGTTGATGACGGTGAATTTTTAGCCATAGTTGGTCCGTCCGGTTCCGGTAAATCGACACTGCTACGAATTATTG
GCATGTTGGATAATGAATACACCGGCACTTATCAATTTAACAAACAAATCATCGGCGATCTGAGTGACGATATTGTTTCC
GAAATTCGTAATCATCGGGTTGGTTTTATTTTCCAAAACTTTGAACTGCTTGCCAGATATACTGTTGGCGAAAATATCAA
GCTGCCTTTACTTTATGGAAAAGATCGCGATGATCCAGATAATCACGTTTTAGAACTTCTGGAGATGGTTGGACTCCAGG
ATAAAATTGACGAGTATCCAGCTAGTCTATCCGGTGGGCAGCAGCAAAGAGTGGCAATAGCGCGATCACTCATTTTGAAC
CCTAGCCTTATCATAGCCGATGAGCCAACAGGAGCTTTGGATACCACCATGTCCAAAAAAATATTGCAGATACTGTTAAA
AGTCAGTGGCCAGGGAAGAACTGTTATTATGGTCACCCATTCACCAGAAGCTGCCAGTTTTGCCAGTCGTCAAGTCAAGA
TTGTTGACGGTGTACTGACGGAAATATGA

Protein sequence : 
MISLQNINKTYFLKKKGRGQQVLRNINLDVDDGEFLAIVGPSGSGKSTLLRIIGMLDNEYTGTYQFNKQIIGDLSDDIVS
EIRNHRVGFIFQNFELLARYTVGENIKLPLLYGKDRDDPDNHVLELLEMVGLQDKIDEYPASLSGGQQQRVAIARSLILN
PSLIIADEPTGALDTTMSKKILQILLKVSGQGRTVIMVTHSPEAASFASRQVKIVDGVLTEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRHK_2374 YP_005873968.1 ABC transporter family protein NC_012469.1.7686878. Protein 2e-47 48
LRHK_2374 YP_005873968.1 ABC transporter family protein CP001581.1.gene798.p Protein 5e-33 44
LRHK_2374 YP_005873968.1 ABC transporter family protein NC_008702.1.4606598. Protein 2e-36 41