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Name : LRHK_190 (LRHK_190) Accession : YP_005871898.1 Strain : Lactobacillus rhamnosus ATCC 8530 Genome accession: NC_017491 Putative virulence/resistance : Virulence Product : PTS system sugar-specific permease component family protein Function : - COG functional category : - COG ID : - EC number : - Position : 196064 - 197401 bp Length : 1338 bp Strand : + Note : - DNA sequence : ATGAAATTTCTGGTTGATATGCTCAGCCAGCCTTCCATCATTGCCGGAATTGTTGTCTTGGTGGGCTTGATAGCATTACG TAAACCGTTTACCGAAGTCATTGGCGGAACCGTTCGAGCATTTATCGGTTTTGTCGTCATGCTTGCAGGTACCAATATTA TTGTCGGTGCGCTGAATAACTTTGCTAAGTTATTTACCAAGGCCTTCAACATGCATGGCATGATTCCCAGTAACGAAGCG GCAATCGGAGTGACAGTTGCTAAATACGGAACAGTTGCAACTTTTATCTTTGTCTTTGGACTTGTATTGAACATTGTGTT GGCGCGTATTACGAAGTTTAAGTATATTTTCTTATCAAGTGACCATGCGTTTTACATGGCATGTTGTTTAACGCCGATTA TGATCTTAGGCGGCTTAAATACGGTTGAAGCTATCGTCTTTGGTTCCATGACTTTAGGTGTCATTCTCTGCGTCTTCCCA GCCATCGCCCATCCAACGATGAAAATTATTACTGGACGTGACGACATGAGCTTTGCCCATTTCGGCACATTGGAATACTG GCTATCGGCAAAGATCGGATCACTTGTCAATAAGAATAAGAAATCGAAATCGATTGAAGATATTAATTTCCCGAAGTCAT TAGCATTTTTACAAGATAGCAATGTTTCCGTTACGATTGTGATGACCATCTTGTTCTTCGTGGTGACGGCAGTGGCCGGG CCGGCGTATGTTGGTAAGCTAACTGACTTGAATCCATACGTTTGGGCGCTCTTGCAAGCTGCTCAGTTTACCGCGGGCAT TATCGTCTTAGTCCAAGGCGTTAATATGTTATTAGCTGAGATCACACCGGCTTTCAAAGGGTTCAGCGAAAAGATTGTTC CAAGCGCCGTACCCGGTTACCCATTTGCCATTCTGTTTAAGGGCACATCCAACGCATTACTGGCTGGTTTCTTGGTAAGC TTACTCGGTGGTTTACTTTCTATGGGGGTTCAAATCATAATCGGGACAACCATTGTTATTCCGGGGATTGTGATGCACTT CTTCTGTGGCGGTATCGCGGCAATCTTTGGCAATGCTACGGGTGGTCGCAAAGGCGCGCTGATTGGACCGTTTATCGGTG GGATTATTCTAAGCTTTTTGCCTTTGGTCGCCACTGGCCTTTATGGGGGGTTGGGTTACACTGCAACTTATTGGTCTGAT AGTGATTTCAATACAATCGGGGTGTTACTTGGACTTGTTGCTAAAGTTGGTAAGTGGCCGATTATGCTGGCTGCATTGAT TATCTTTGCCTTCCCATTTGTCTTTAGTGCTTTACACAAGAAAAAACTGGTTGATTAA Protein sequence : MKFLVDMLSQPSIIAGIVVLVGLIALRKPFTEVIGGTVRAFIGFVVMLAGTNIIVGALNNFAKLFTKAFNMHGMIPSNEA AIGVTVAKYGTVATFIFVFGLVLNIVLARITKFKYIFLSSDHAFYMACCLTPIMILGGLNTVEAIVFGSMTLGVILCVFP AIAHPTMKIITGRDDMSFAHFGTLEYWLSAKIGSLVNKNKKSKSIEDINFPKSLAFLQDSNVSVTIVMTILFFVVTAVAG PAYVGKLTDLNPYVWALLQAAQFTAGIIVLVQGVNMLLAEITPAFKGFSEKIVPSAVPGYPFAILFKGTSNALLAGFLVS LLGGLLSMGVQIIIGTTIVIPGIVMHFFCGGIAAIFGNATGGRKGALIGPFIGGIILSFLPLVATGLYGGLGYTATYWSD SDFNTIGVLLGLVAKVGKWPIMLAALIIFAFPFVFSALHKKKLVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 7e-59 | 42 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 6e-59 | 42 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 6e-59 | 42 |
