|
Name : serS (LRHK_1873) Accession : YP_005873482.1 Strain : Lactobacillus rhamnosus ATCC 8530 Genome accession: NC_017491 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : - Position : 1822752 - 1824035 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGTTAGATCTCAAGTTGATTCGGCAAAAGCCGGAGTGGGCAAAAAAGAAGTTGGCTGCTCGCGCGATCAAGGGTGAGGA AATCGATGAATTAATCGCCCTTGATGAGAAACGACGTAAGGTAACAGTTCAAACCGAGGAGTTAAAGGCAAAGCGTAATG AAGTTTCCGGCCAGATCGCGGTGATGAAACGGAACAAAGAAAACGCTGACGAGCAAATCGCGGCTATGCGTGAAGTTGGT CAAAAAATCAGCCAGTTAGATAAAGAATTAGCAGAACTGAATGAAAAAGTCACCTATATTCTGGTTCGGTTACCTAACTT TCCGGCTGATGATGTCCCGATGTCACTAAATGAAGACGACTCGCGTGAAGAATATAAATGGGGCAACATTCCTCATTTCG ATTTTCAACCGAAACATCACTGGGATATCGGCGAGAAACTAGGTATTTTGGACTTTGAACGGGCGGCCAAAGTATCAGGT AGCCGCTTTGTCTACTATAAAGGTGCAGGTGCGCGACTAGAGCGAGCCGTTTATAACTTCTTCTTGGATGAACACCAAAA AGAAGGCTATGAAGAAATTATTCCACCATATTTGGTTAACAACGATTCAATGTTTGGCACGGGTCAATTTCCTAAGTTTA CTGATGCAACGTACACCATCACAAACGATGGGGAGCCATTAACCATGATTCCAACCGCAGAAGTGCCGCTGGTCAATTAT TATCGCGGGGATATTATGGATGCTGCCAAATTGCCGGTTAACTTCACCGCACTGACACCAGCCTTTCGTTCCGAAGCAGG AAGCGCAGGCCGGGATACTCGTGGATTAATCCGGATGCATCAATTTAACAAGGTCGAAATGGTCAAGTTTTGCAAACCCG AAGATTCCTGGAAAGAATTAAAAAACTTGATTCACGATGCAGAGGACCTGTTACGCAAGTTGGGCCTTCCGTATCACGTC ATCACCTTAGCCAGCAACGATGCCAGCTTTACGAGTGCTAAAACAAACGATCTTGAAGTGTGGTTCCCGGCACAGGATCG CTATCGTGAAATTTCGAGTTGCAGTAATTGCACGGATTTCCAGGCACGTCGAGCACAAATCCGTTATCGCGATGATGATG GCAAGCTGCAATTTGTTCATACACTCAACGGCTCAGGCCTTGCAGTGGGACGGACCGTCGCTGCCATTCTTGAAAATTAT CAGCAAGCCGATGGAACGGTTAAGATTCCTGACGTTCTGGTTCCCTACATGCACGGCCAAACTGCAATCAAGCAGGAAGA TTAA Protein sequence : MLDLKLIRQKPEWAKKKLAARAIKGEEIDELIALDEKRRKVTVQTEELKAKRNEVSGQIAVMKRNKENADEQIAAMREVG QKISQLDKELAELNEKVTYILVRLPNFPADDVPMSLNEDDSREEYKWGNIPHFDFQPKHHWDIGEKLGILDFERAAKVSG SRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTMIPTAEVPLVNY YRGDIMDAAKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWKELKNLIHDAEDLLRKLGLPYHV ITLASNDASFTSAKTNDLEVWFPAQDRYREISSCSNCTDFQARRAQIRYRDDDGKLQFVHTLNGSGLAVGRTVAAILENY QQADGTVKIPDVLVPYMHGQTAIKQED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-128 | 61 |
