Gene Information

Name : xerD (LRHK_1371)
Accession : YP_005873007.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1314636 - 1315517 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGCATGGGTTGATTGCTGATTTTATTCATTATCTGGATGTTGAGCGCGGGCTGGCCCGAACAACGCAGGTCAGCTATCA
GCAGGATTTAACCACCTTTATGGCTTGGTTAAGCGACCAAAAGCAAACAACTTTTCCCGAAGATTTTGGGGTTATTCAGG
CGTTCTTAAAGCATCAAAATGATACCAAAGCGCCTGCATCAGTCAGTCGAATGATTTCGGCGTTACGCAAGTTTTACCGG
TTCTTGTTACGCGAAGGCGCCATTAAGTCTGACCCGATGACCAAAATCGATACCCCTAAAAAAGCACAACATTTACCGGC
CACATTATCAGGGACGGAAATTGATGCTTTGATGGCAAAGCCGGATACCACTAAGCCGTTGGGATTGCGTGATCGCGCTA
TTTTTGAGCTGATGTATGCGACTGGCTTGCGGGTATCGGAAGTTGTCGGATTGCGATTGGATCAGTTACATTTAGCAATG
AACTTGCTTCAGGTTACCGGAAAAGGCGATAAGGAGCGACTGGTTCCAATCAGTCCCCAAGCAGCCGATTGGGTTAACCG
GTATTTGCAGGAATCCCGTCCGCGTTTGATCAAACACCAGCAACCCAAGGCAGTGTTCGTCAACTTTCATGGTCATGCGC
TCACCCGTCAAGCAATTTGGAAGAATCTGAAAGCCTATATTGCAAGTGTTGGCATTGAAAAGGATGTAACACCGCATACG
TTACGGCACAGTTTTGCCACGCGTCTGTTGGAAAATGGCGCCGATTTACGGGTGGTTCAGGAGTTACTGGGGCATAGTGA
TATTAGTACCACCCAAATCTATACACATCTGAGTAATCAGCATCTAGTGGCGGTTTATCATAAAACCCATCCTCGTGGCT
AA

Protein sequence :
MHGLIADFIHYLDVERGLARTTQVSYQQDLTTFMAWLSDQKQTTFPEDFGVIQAFLKHQNDTKAPASVSRMISALRKFYR
FLLREGAIKSDPMTKIDTPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAM
NLLQVTGKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQAIWKNLKAYIASVGIEKDVTPHT
LRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYHKTHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-57 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-57 44