Gene Information

Name : lpdA (LRHK_1313)
Accession : YP_005872951.1
Strain : Lactobacillus rhamnosus ATCC 8530
Genome accession: NC_017491
Putative virulence/resistance : Unknown
Product : dihydrolipoyl dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1253423 - 1254826 bp
Length : 1404 bp
Strand : +
Note : -

DNA sequence :
ATGGTTGTAGGCGATTTTGCAATCGATTTGGACACCGTTGTGATTGGCTCTGGCCCAGGTGGTTACGTAGCTGCGATCCG
AGCAGCCGAAATGGGTCAAAAGGTAACTGTTATCGAGAATACCTTCATTGGCGGGGTTTGTTTGAATGTTGGCTGTATTC
CATCAAAAGCTTTGATCAATGCCGGTCACCGTTATCAAGATGCCTTGGAAGCAAGCACGTTTGGTATTAATGCCAAGGGT
GCGGATCTTGATTTCAAAAAAACCCAGGATTGGAAGCAAAACAAGGTTGTACACACGTTAACCAGCGGTGTTGCGATGCT
TTTAAAAAAGCACAAAATCGAAACCATTATGGGGACGGCTTTCTTGAAAGATGATCATAGTCTGCGGGTTATGCAAAAAG
ACTCGGCTCAGACATACACCTTCAAGAATTTGATCATTGCAACCGGAAGCCGGCCAATTGAAATCAAAGGCTTCAAATTT
GGCAAACGGATTTTGGATTCAACCGGTGGCCTAAACTTACCGGAAGTACCAAAAGAATTCGTGGTGATTGGCGGTGGCTA
CATCGGATCCGAACTGGCGAGCGCCTATGCTAACCTAGGCGCACATGTCACAATTCTTGAAGGCACCAGCTCAATTTTGC
CAAACTTTGAAAAGGATATGGTTCAACTCGTCTTGAACTCCTTTAAAAAGCGCGGCGTTACAGTGATTACCAACGCGATG
GCGAAGGAAGCCGAAGATACCGGCAATGGCGTCAAGGTAACCTATACAGCGGACGGTAAAGAACAAACCATTGCCGCAGA
TTATGTGATGGTCACAGTCGGGCGGCGGCCAAATACCGATGATTTGGGCTTAGACATTGTTGGCATTGAAACAACGGATC
GCGGCTTGATCAAAGTCGATGCGCAAGGACGAACCAATAAGCCTAATATTTATGCAATCGGTGACATTGTTCCTGGTGCT
GCATTAGCGCATAAAGCAAGTTATGAAGGTAAGATAGCGGCAGAGGCGATCAGTGGCAAGGCAAGCGCGGTTGACTATAA
AGCAATGCCGGCGGTTTGTTTCACGGATCCGGAACTGGCCACAACCGGCATGACGCTTGCTGAGGCAAAGGATAAAGGCA
TCAAAGCTAAAGCAAGCAAGTTTCCATTTGCGGCGAATGGCCGTGCTTTAAGTTTGGCGCAAACCGAGGGCTTCGTTCGT
CTGGTTACGGATGAAAACGGAACCGTCATCGGTGGTCAAGTTGCTGGCGCCGGTGCCAGTGATTTGATCTCAGAATTGAC
GGTCGCCGTTGAAGGTGGACTCAACGCTGAAGATTTGGCGTTGACCATCCATCCACATCCGACCTTAAGTGAAACCATTA
TGGATGATGCTGAAGTTGCATTAGGGTTGCCAATTAATATCTAG

Protein sequence :
MVVGDFAIDLDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDALEASTFGINAKG
ADLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKF
GKRILDSTGGLNLPEVPKEFVVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM
AKEAEDTGNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNKPNIYAIGDIVPGA
ALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVR
LVTDENGTVIGGQVAGAGASDLISELTVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-103 48