Gene Information

Name : LCGL_0662 (LCGL_0662)
Accession : YP_005870406.1
Strain : Lactococcus garvieae Lg2
Genome accession: NC_017490
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 675461 - 677461 bp
Length : 2001 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGACAACACCGATCAGTTAGCTGTAAATTCAATCCGTACTTTGTCAATGGATGCTATCCAAAAAGCAAACTCTGG
ACATCCAGGATTGCCAATGGGTGCGGCACCAATGGCTTATGTTCTTTGGAGCAAGTTTTTGAATGTAAACCCACAAACAG
GACGTAAATGGTCTAACCGCGACCGTTTTGTCCTTTCTGCAGGACACGGTTCGGCAATGCTTTACAGTCTTTTACACTTG
GCAGGGTACAAAGTATCAATAGATGATTTGAAAAACTTCCGCCAATGGGGCTCAAAAACTCCAGGACATCCTGAAGTAGA
CTGGACAGATGGTGTGGAAGCGACTACAGGTCCTTTAGGACAAGGTATCGCCAATGCTGTTGGTATGGCAATGGCCGAAG
CACATTTAGCTGCTACTTACAATAAACCAGATTTTGATATTGTGGATCACTATACTTATGCCTTAAATGGTGATGGTGAC
CTTATGGAAGGTGTTTCTCAAGAAGCAGCGTCACTCGCTGGTAAGTTAAAACTTGGAAAACTTGTACTTTTCTATGATTC
AAATAATATCTCTCTTGATGGTGATTTGGATAAATCATTTATCGATGATATTAAAATGCGTTTTGAAAGCTACGGTTGGC
AACATATCTTGGTTAAAGACGGCAACGATTTGACTGAAATTGCAGCAGCTGTAGAACAAGCAAAAGCTGAAACTGAAAAA
CCAACAATTATTGAGGTTAAGACTGTTATTGGATATGGTGCTGAAAAACAAGGCACTTCAGCAGTACACGGTGCCCCTCT
AGGTGCAGAAGGTATTGAATTTGCGAAGAAAGCTTATGGTTGGGACTATCCAGAATTCACTGTTCCTGAAGAAGTTACTG
AGCGTTTCCGTCAAACATTGAATACACGTGGCGAAGCTATGGAACAAGTATGGAACGATACTTTCACGGCTTACGCTGAA
AAATATCCAGGGCTTGCTGAACAATATGTAAAAGCATTTGAAAATGAAACACCTGAACTTGAATTAAGCAAGCATGAACT
TGGTTCAAGCAAAGCTTCACGTGTAACTTCACAAGAAGCTATCCAAGAACTTTCAGCACAAATGCCAAACCTTTGGGGTG
GTTCAGCTGACTTATCAGCATCAAACAATACAATGGCTAAAAATGATACAGACTTTATGCCAGATAACTATGCTGGTCGT
AACATTTGGTTTGGTGTCCGTGAATTTGCGATGGGCGCAATTATGAACGGTATTGCTCTCCATGGCGGTACACGTGTTTA
TGGTGGTACCTTCTTCGTTTTCAGTAATTATATGCTTCCTGCTGTCCGTATGGCTGCACTGCAAGAATTGCCTGTTACAT
ATGTTTGGACACACGATTCGATCGCGGTTGGTGAAGATGGTCCAACACATGAGCCTGTCGAACAATTGGCTTCAGTACGT
TCTATGCCAAACTTAGATACGATTCGTCCTGCAGATGGTAATGAAGTTGTTGCCGCATGGCGTCGTGCAGCTTCAAGCAA
AAAACGTCCAACAGCGCTTGTTTTGACACGTCAAAACTTGCCAGTTCTTGAAGGAACAGCACAATTGGCTGAGGAAGGCC
TCAATCGTGGTGCCTACATTCTCTCCAAAGAAGAAGGTGAACTTGAAGGAATTATCATCGCAACAGGTTCAGAAGTAGCA
CTTGCGCTTGAAGCTAAAAAAGAATTAGGAAAAGGCGTACGTGTTGTTTCTATGCCTTCAATGAATATCTTTGACGAACA
ATCTGCAGAATATAGAGAAGAAATTCTTCCGAAAAATGTCTGCTGCCGTTTGGCTGTCGAAGCAGGAACAAGCTTCGGCT
GGGCGAAATATATTGGTTTAGCTGGAGCTACTGTAACCGTAGATAAATGGGGCGCTTCAGCACCTGCAAATATTGTTTTA
CCAGAGTATGGCTTTACAGTAGAAAATGTTGTAAAAACATATAAAGAAATGAAAGAAAACTGTCCTAAAGATTGCTGCTA
A

Protein sequence :
MFDNTDQLAVNSIRTLSMDAIQKANSGHPGLPMGAAPMAYVLWSKFLNVNPQTGRKWSNRDRFVLSAGHGSAMLYSLLHL
AGYKVSIDDLKNFRQWGSKTPGHPEVDWTDGVEATTGPLGQGIANAVGMAMAEAHLAATYNKPDFDIVDHYTYALNGDGD
LMEGVSQEAASLAGKLKLGKLVLFYDSNNISLDGDLDKSFIDDIKMRFESYGWQHILVKDGNDLTEIAAAVEQAKAETEK
PTIIEVKTVIGYGAEKQGTSAVHGAPLGAEGIEFAKKAYGWDYPEFTVPEEVTERFRQTLNTRGEAMEQVWNDTFTAYAE
KYPGLAEQYVKAFENETPELELSKHELGSSKASRVTSQEAIQELSAQMPNLWGGSADLSASNNTMAKNDTDFMPDNYAGR
NIWFGVREFAMGAIMNGIALHGGTRVYGGTFFVFSNYMLPAVRMAALQELPVTYVWTHDSIAVGEDGPTHEPVEQLASVR
SMPNLDTIRPADGNEVVAAWRRAASSKKRPTALVLTRQNLPVLEGTAQLAEEGLNRGAYILSKEEGELEGIIIATGSEVA
LALEAKKELGKGVRVVSMPSMNIFDEQSAEYREEILPKNVCCRLAVEAGTSFGWAKYIGLAGATVTVDKWGASAPANIVL
PEYGFTVENVVKTYKEMKENCPKDCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 6e-131 52
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-127 49