Gene Information

Name : LCGL_1838 (LCGL_1838)
Accession : YP_005871582.1
Strain : Lactococcus garvieae Lg2
Genome accession: NC_017490
Putative virulence/resistance : Unknown
Product : choline ABC transporter ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1807437 - 1808279 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGACTATTACATTTAAAAATGTCACTAAAAAATACGGAGACAAAGCCGTACTTTCAGATATCAACTTCTCCATTGAAAG
TCATGAGTTTTTTGTACTCGCAGGATCTTCTGGTGGCGGAAAAACAACATTACTCAAGATGATTAACCGGCTCATCGAAC
CCAATGAAGGGCAGGTTCTTATTGATGATCAAGATATTCAAACGATTAATTTAAGAGACTTGCGTCTTCAAATAGGATAT
GTTCTCCAGCAAATTGCGCTCTTTCCTAACATGACCGTTTTAGAAAATATTGGTCTCATCCCGACGATGAAAGGTTGGAG
CAAAAAAGAAACCCGTGCGCGTGTACTCGAACTCCTTCCTTTAGTTGGTCTAGATGCTGAAAAGTACCTTAACCGCTATC
CTCACGAACTTTCTGGGGGTGAAGCACAGCGGATTGGTATTTTGCGTGCTATTGCCTGCAAGCCAAAGATTATTTTAATG
GACGAACCCTTCTCCGCTCTGGATCCTATCTCTCGTAAACAGCTACAGGAACTGGTCAAAGATTTGCAGAAAACCTTGAA
AATCACAACAGTTTTTGTTACCCACGATATGTCTGAAGGAATGGCGATGGCTGACCGTATCGCGATTCTCAAAGATGGGG
AACTGCAGCAGGTGGGCCGTCCTCAAGAAATTTTAAATGCCCCAGCAAATACTTTTGTGGCCGACTTCTTCACGGATTAT
CAGCAAGATTTGTCTCAATATAAGTTAAAAAATCTTGAACAAGCTCTTGCGACACATGCTTTTTCGGAAGAAACGCCTTT
GGCAGAAATCTTAAATAGTCTGGAGGCTGATGCCCATGAATAA

Protein sequence :
MTITFKNVTKKYGDKAVLSDINFSIESHEFFVLAGSSGGGKTTLLKMINRLIEPNEGQVLIDDQDIQTINLRDLRLQIGY
VLQQIALFPNMTVLENIGLIPTMKGWSKKETRARVLELLPLVGLDAEKYLNRYPHELSGGEAQRIGILRAIACKPKIILM
DEPFSALDPISRKQLQELVKDLQKTLKITTVFVTHDMSEGMAMADRIAILKDGELQQVGRPQEILNAPANTFVADFFTDY
QQDLSQYKLKNLEQALATHAFSEETPLAEILNSLEADAHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-46 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-47 46