Gene Information

Name : LCGL_1056 (LCGL_1056)
Accession : YP_005870800.1
Strain : Lactococcus garvieae Lg2
Genome accession: NC_017490
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1076015 - 1077160 bp
Length : 1146 bp
Strand : +
Note : -

DNA sequence :
ATGAAATTAAAAACAAAGATGATTCACGGTGGCATCAGTGAAGATGCTACAACCGGAGCGGTTTCTGTTCCTATCTATCA
AGTGTCGACATATAAGCAAGATGGCCTTGGTCAGCCCAAAGCCTATGAATATTCAAGATCTGGGAACCCTACGCGTCATG
CTTTAGAGAAACTTATTGCCGACTTAGAAGGTGGTGTGCAGGGCTTTGCTTTCGGCTCAGGTTTAGCTGGTATTCATGCC
GTTCTTTCTATTTTTAAATCGGGGGACCACTTGATTTTAGGTAATGATGTTTATGGGGGAACTTTCCGCTTAATGGATAA
AGTCATGTCTAATTTTGGTTTAGAATATGATTTGGTGGATTTGACAGACATTGCTGCTTTAAAAGATAAGATTAAAGCCT
CAACCAAGGCCATATATTTTGAAACGCCTTCCAATCCTCTGATGACTGTTTTAGATATCCAAAAACTTGCAGATATTGCT
AAGGAAAATAATCTACTGACAATCGTTGACAATACTTTTGCCACACCTTACTTCCAACGTCCCTTAAGTTTAGGTGCGGA
TATTGTCTTGCATTCCGGCACGAAGTACCTTGGTGGACATTCCGATGTTGTTTCAGGGCTTGTCACAACAGATAAAGAAG
ATTTGGCTGAACGTATCGCCTTCATGCAAAATTCAATTGGTGGTGTTTTAGGTCCTCAAGATAGCTGGTTGGTTCAAAGA
GGAATCAAAACTTTGGCACTTCGTATGGAGGCTCATGCTAAAAATGCTCAAAAAATTGCAGAATATCTTGAAGCATCAGA
GGAAGTGAGCAAAGTCTATTATCCAGGTCTCCCGCAAGATCCAGGATATGAGATTGCTTCCCAACAAATGTCTGGTTTTG
GAGGAATGCTTTCTTTCGAGCTTAAGGATGAACGTAAAGTCAAAGACTTTGTTGAAGCTTTAGAATACTTTAATTTAGCT
GAATCCCTCGGTGGTGTAGAAAGTCTGATTGAAGTACCTGCAGTGATGACGCATGCTTCAATACCGAAAGACATTCGTGA
AGCAGCGGGCATTAAGGATGGACTGATTCGCCTATCTGCAGGTATCGAAGATATCCATGATTTATTGGAAGACTTGAATA
GGGCTTTTGAGAAAATGAACTCTTAA

Protein sequence :
MKLKTKMIHGGISEDATTGAVSVPIYQVSTYKQDGLGQPKAYEYSRSGNPTRHALEKLIADLEGGVQGFAFGSGLAGIHA
VLSIFKSGDHLILGNDVYGGTFRLMDKVMSNFGLEYDLVDLTDIAALKDKIKASTKAIYFETPSNPLMTVLDIQKLADIA
KENNLLTIVDNTFATPYFQRPLSLGADIVLHSGTKYLGGHSDVVSGLVTTDKEDLAERIAFMQNSIGGVLGPQDSWLVQR
GIKTLALRMEAHAKNAQKIAEYLEASEEVSKVYYPGLPQDPGYEIASQQMSGFGGMLSFELKDERKVKDFVEALEYFNLA
ESLGGVESLIEVPAVMTHASIPKDIREAAGIKDGLIRLSAGIEDIHDLLEDLNRAFEKMNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-100 54
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-101 54
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-74 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGL_1056 YP_005870800.1 cystathionine gamma-synthase BAC0207 Protein 7e-71 43