Gene Information

Name : LCGL_1047 (LCGL_1047)
Accession : YP_005870791.1
Strain : Lactococcus garvieae Lg2
Genome accession: NC_017490
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1067642 - 1069678 bp
Length : 2037 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGATGAACATAAAGAGCATATGCATCACGAGATGCATGATATGGCAGAAATGGACCATCATGACGGACACGATAT
GATGAACCATGGAGGGTATATGATGCACATGGGTAACATGGGCAAGAAGCTGAAGGTCAGCATTGCGCTTATGGTGCCTT
TGCTTGCTATTTCAAGTATTGCCGGATTTCAGCTGATTAGCTTTCAAGGCGATTCGATTGTCAGACTTATTTTAGGATCT
ATCATTTTCTTCTATGGTGGCACTCCTTTCTTTAGCGGCGCACGTGGTGAATTTCAATCCCGTAAACCAGCGATGATGAT
GCTCATTACGATGGGGATTGTCGTGGCTTATGCTTACTCTGTTTATGCTACGGTCTTATTATGGACAGGTGGGGAGGCAA
TGGACTTTTGGTTTGAGCTCTCGACCCTGATTGTTATCATGCTGGCAGGTCACATTATAGAGATGCGGGCAGTGAGTCGT
GCAGGCGATGCTCTTAAGGAACTCGCATCCCTCATTCCTAAAAAAGCACATCTGAAAGACGGAAAAGATGTGACCATCTC
TGAGCTCCAAGTGGACGATATTCTTCTCGTAAAAGAAAACGAACGTATTCCAGCTGATGGTATTGTGACATCAGAAACGA
CTCATTTGTCTATCGATGAATCGATGATCACAGGTGAATCGCGTTTGGTCGCAAAAGAAGCAGGAGATACAGTTTACGGT
GGTTCTCTAAACCAGAACCTCCCTTTTGAAATGAAAGTGACTTCACTAGGAAAAGATTCTCTTCTGGCGCAAATTGCGCA
ATTGGTAGAGAAGGCGCAAAAGCAAAAATCTGCCAGTGAAAACTTAGCGGATCGTGTGGCAGGTTGGCTTTTCTGGGCAG
CATTGAGCGTGGGTCTTGCTTCCTTTATCATTTGGACGATGACTTCTTCATTGAGCTTTGCGCTCATGACTGCGGTATCC
GTCTTTGTCATTGCTTGTCCTCATGCTTTAGGTTTGGCTGTACCTTTAGTCGTGGCACGCTTAACCAACCTTTCGGCTAA
AAATGGTTTATTGATTCAAAATCGTACCTCCCTTGAATCTATTAGTAAGATAAAATACGCGCTTATGGATAAAACCGGTA
CATTAACAGACGGAAAATTTAGTGTACGTCAAGTTGTCGATTTGGCTAAGGATGATAAGGTAGATCTACTACAAGTTATG
GCTGCATTAGAAAGTGGCTCAACACACCCTATTGCCCTCTCCATTGTCAATGCTGTTGACGATTTGAAGTTAGAAGCAGA
AAATCTGGAAAACATTCCTGGTGTGGGATTGAAAGGGACAGTCCAAGGGAAAAATTACAGTATCGTCTCTTACGCTTACC
TCAAAGAAAATGACATCACGATTGATGAAGCAGAAGTTCAAAAGGTTTTTGATCAAGGCTTAACGGTTTCCTTCCTCGTT
TCGGATAAAACACTTTACGGCTTTGTTGCTTTAGGTGATTCACCAAAAGAAGATGCGAAATTCTTTATCGAAGAGTTGAA
AAAACGTGATATCACACCTGTAATGCTGACCGGAGATAATGAAGCCACTGCAGCAAAAATTGCAAAAAATCTTGGTATTG
CTGAATACCGTGCTGAATTAAAACCAGAAGATAAAGCAAATATTGTTCAAGATTATCAAGAAAAAGGCGGTGTTCTCTTT
ATTGGTGACGGTGTCAATGACTCGCCTGCGCTTGCTACAAGTGATCTCGGCATTGCGATCGGAGGTGGAACATCTGTCGC
CATCAATACAGCAGATGTTGTCTTAGTCAATTCACATCCGAGTGATGTTTTAGCACTGATTGAGATTGCAAAACGCTCTA
ATCGCAAAATGAAACAAAATCTTTGGTTTGGGGCAGGATATAATATCATTGCCATTCCTGTTGCGGCAGGAATTCTTTAC
CCAACCTTTGGTATCTCTATTGATCCACTGGCAGCTGCAGTATTGATGAGTATTTCAACTGTGGTTGTCTCAATCAATGC
GATGGGACTAAAATATGAAAGACCACAAGAAAAATAA

Protein sequence :
MKDEHKEHMHHEMHDMAEMDHHDGHDMMNHGGYMMHMGNMGKKLKVSIALMVPLLAISSIAGFQLISFQGDSIVRLILGS
IIFFYGGTPFFSGARGEFQSRKPAMMMLITMGIVVAYAYSVYATVLLWTGGEAMDFWFELSTLIVIMLAGHIIEMRAVSR
AGDALKELASLIPKKAHLKDGKDVTISELQVDDILLVKENERIPADGIVTSETTHLSIDESMITGESRLVAKEAGDTVYG
GSLNQNLPFEMKVTSLGKDSLLAQIAQLVEKAQKQKSASENLADRVAGWLFWAALSVGLASFIIWTMTSSLSFALMTAVS
VFVIACPHALGLAVPLVVARLTNLSAKNGLLIQNRTSLESISKIKYALMDKTGTLTDGKFSVRQVVDLAKDDKVDLLQVM
AALESGSTHPIALSIVNAVDDLKLEAENLENIPGVGLKGTVQGKNYSIVSYAYLKENDITIDEAEVQKVFDQGLTVSFLV
SDKTLYGFVALGDSPKEDAKFFIEELKKRDITPVMLTGDNEATAAKIAKNLGIAEYRAELKPEDKANIVQDYQEKGGVLF
IGDGVNDSPALATSDLGIAIGGGTSVAINTADVVLVNSHPSDVLALIEIAKRSNRKMKQNLWFGAGYNIIAIPVAAGILY
PTFGISIDPLAAAVLMSISTVVVSINAMGLKYERPQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-101 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGL_1047 YP_005870791.1 copper-translocating P-type ATPase BAC0079 Protein 8e-117 48
LCGL_1047 YP_005870791.1 copper-translocating P-type ATPase BAC0629 Protein 1e-100 45
LCGL_1047 YP_005870791.1 copper-translocating P-type ATPase BAC0383 Protein 5e-107 45