Gene Information

Name : nrdE (CVCAS_0941)
Accession : YP_005868324.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 985808 - 987976 bp
Length : 2169 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCTAAAACAACTTAAAGATGTAACTTATTTCAAGCTTAATAACGAGATTAATATTCCCGTTAATGGTAGCATTCC
TCTTGCTAAAGATAAAGAAGCAATTACTGCTTTTTTTAAAGAAAATGTCGAACCTAATCGTTATGAAGCCGATACATATA
TCGATAAACTCAATTGGCTCGTTAAAGAAGAATATCTAGAAGCTGAGTTTCTTGAAAAATATAAACCCGAATTTATTACC
AATCTTCGGAAAGAATTGAGTAAATTTGAATTTCATTTTGATTCATTTATGGCTGCTTACAAATTTTATAATCAATATGC
CATGAAAAACAATGACGGTTCTCTCTATCTTGAAGATTTTGAAGACCGTGTGTTAATGAATGCTTTATACATGGCTGACG
GCGATGAAAAATTAGCTAATAATCTTGCTTTTGCAATGATTAATCGTCGTTATCAACCTGCGACTCCTACTTTTCTAAAT
GCTGGACGTAAGCGTCGTGGTGAATTTGTTTCTTGTTTCCTTCTACAATTAACTGATGATATGAATTCAATTGGACGAAC
AATTAACTCTGCCTTGCAACTTTCTAAAAATGGTGGTGGTGTTGGTCTAAACTTGACTAATTTACGTGCTGCTGGTGCAC
CTATCAAAGGTTACGATGGAGTGGCAGCTGGTGTCGTTCCTGTCATGAAACTTTTTGAAGACGCCTTTTCTTATGCCAAT
CAATTGGGGCAACGTCAAGGTGCTGGTGTTGTTTATTTATCACTATTCCATCCAGATATTATGGAATTCTTGTCCACTAA
AAAAGAAAATGCGGATGAAAAAATTCGTGTTAAAACACTCTCTCTTGGGGTTACTGTTCCTGATAAATTCTATGAATTGG
TTAAAAAGGGAGAAACAATGTATCTCTTTGAGCCATATTTTGTTGAAAAATATTATGGTAAACCTTTTGCCGAAGTCGAT
ATTACAGCTGAATATGACAAAATGGTAGCCAATCCAGAAATTCGTAAAACATCGATTAATGCCCGTGAACTTGAACAAGA
ACTTTCAAAACTTCAACAAGAATCTGGTTATCCTTACATCGTAAATGTTGACACAGTCAATCAAGCTAACCCTGTTGATG
GTGTAATTTCAATGTCTAACCTTTGTTCTGAAATTTTGCAAGTCCAAACGCCTTCTGTTTTGAACGATGACCAAACTTAT
AAGGTGGTTGGAACTGACGTCGCTTGTAACTTGGGTTCAACTAATGTTTTGAATATGATGACTTCTAGCAATGAATTTGG
AACTTCTATTGAAGCAATGGTTCGCGCTTTAACTTTCATCTCCGAAACTTCAAACCTCGATACTGTTCCAACTGTTCGTA
AAGGTAATGATGAAATGCATGCGATTGGGCTTGGAGCAATGGGCTTACATTCTTTCTTAGCACAAAATCAAATTCATTAT
GACAGCAAAGAAGCCGTTGAATTTACTAGTGTTTATTTCATGTTGTTGAACTATTATACTTTAGTGGCTTCAAATAAATT
AGCTGTTGAAAAAGGGTCTAGCTTCAAGAATTTTGAAAAATCTGCCTATGCTGATGGTTCTTATTTTGATAAATATTTAA
CACATGATTATTTTGCAGCTGTCTCTTCTAAAGTTCAAGAACTTTTCAAAGGGATTGCTGTTCCAACAATCGAGGATTGG
ACTGCTTTACGTGACACAGTAAAAACTTCTGGACTCTATAATTCATACCGTATGGCTGTGGCTCCAAATGGTTCTATTTC
TTATATCAATGACTGTTCTTCTTCTATTCACCCAATTGTCAATCGCATCGAAGAACGTCAAGAAAAGAAAGTTGGGAAAA
TTTATTATCCAGCTGCTGGACTTGCCACTGAAACAATTCCTTATTACAAATCAGCTTATGATACAGATATGCGTGCAGTA
ATTGACGTTTATGCAGCTGCTACAGAACATGTTGACCAAGGTTTGTCACTCACTTTATTTATGCGTTCAACTTTACCTGA
AGGTCTCTATGAATGGAAAGTGGCAAATAATAAAATGACAACTCGTGACTTGTCTATTTTGCGTAACTATGCTTACAAAA
AAGGAATCAAAACAATTTACTACATTCGTACATTTACTGACGACCAAGAAGAAGTCGGTGCTAACCAATGTGAAAGTTGC
GTTATTTAA

Protein sequence :
MSLKQLKDVTYFKLNNEINIPVNGSIPLAKDKEAITAFFKENVEPNRYEADTYIDKLNWLVKEEYLEAEFLEKYKPEFIT
NLRKELSKFEFHFDSFMAAYKFYNQYAMKNNDGSLYLEDFEDRVLMNALYMADGDEKLANNLAFAMINRRYQPATPTFLN
AGRKRRGEFVSCFLLQLTDDMNSIGRTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYDGVAAGVVPVMKLFEDAFSYAN
QLGQRQGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEPYFVEKYYGKPFAEVD
ITAEYDKMVANPEIRKTSINARELEQELSKLQQESGYPYIVNVDTVNQANPVDGVISMSNLCSEILQVQTPSVLNDDQTY
KVVGTDVACNLGSTNVLNMMTSSNEFGTSIEAMVRALTFISETSNLDTVPTVRKGNDEMHAIGLGAMGLHSFLAQNQIHY
DSKEAVEFTSVYFMLLNYYTLVASNKLAVEKGSSFKNFEKSAYADGSYFDKYLTHDYFAAVSSKVQELFKGIAVPTIEDW
TALRDTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRIEERQEKKVGKIYYPAAGLATETIPYYKSAYDTDMRAV
IDVYAAATEHVDQGLSLTLFMRSTLPEGLYEWKVANNKMTTRDLSILRNYAYKKGIKTIYYIRTFTDDQEEVGANQCESC
VI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 3e-167 51