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Name : copB (CVCAS_0812) Accession : YP_005868203.1 Strain : Lactococcus lactis CV56 Genome accession: NC_017486 Putative virulence/resistance : Resistance Product : copper-translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.4 Position : 854502 - 856589 bp Length : 2088 bp Strand : - Note : - DNA sequence : ATGTCAAATAAAACTCATTCGTCTAATCACGATGAAATGATGTCTGAGCATCATCATAATCATGAAATAATGGATATGGA GCACGAAAACCATGAGATGCACAACATGCACAATATGGATAATATGCATGATATGGACAATATGGATATGATGAATCATG GAGGACACATGATGCATATGGGTGATATGAGTAAAAAGCTCAAAGTGGCTATCATTCTTATGATTCCGCTTCTACTCATT TCACCAATCGCGGGCTTTACTATCCTTAAATTCCCCGGAAGTGAAATTTTGCAACTCATCCTTGGTACAATTATCTTCTT TTACTCTGGGACTCCTTTTTTTAGCGGAGCAAAAGGTGAATTAAAAAGCCGTAAGCCAGCCATGATGATGCTGATTACAA TGGGAATTACCGTTGCCTATGCTTATTCTGTTTACGCCACAATCATGAGTCTTAACGGACATATGGGCATGAACTTCTGG TTTGAACTGGCAACTTTAATTGTCATTATGTTGATTGGTCACCTGATTGAGATGAAAGCAATCATGGGTGCTGGCGATGC ATTGAAAGATTTAGCAAGCCTTGTTCCCAAAAAAGCTCACTTAAAAAGCGGGAAGGATGTGGAGCTTTCAGAACTAAAAG TTGGCGATTTACTTTTAGTGAAAGAAAATGAGAAAATACCTGCAGATGGCCTTATATTAAGTGAAGCGCTCGTTGATGAG TCAATGATTACTGGTGAAAGCCGAGCAGTCAATAAAAAAACAAATGACCTTGTTTATGGTGGTTCCCTCAATCAAAACCA ACCATTTGAGATGAAAGTCACAACCCTTGGAAAAGATTCATTTCTCAATCAAGTGGCCGAATTAGTCAAGAAAGCCCAAG CTCAAAAATCTAATTTGGAAAATATGGCAGATAGAGTGGCTGGTTACCTTTTCTATGCCGCACTTATTGTCGGTATCTTC TCATTAATTTTTTGGACAATTAGTTCTAACTTTAGTTTTGCTCTACTTCTTGCGGTTTCTGTTTTTGTAATTGCATGTCC ACACGCTTTAGGTCTTGCGGTTCCACTTGTTGTTTCTCGCCTAACCAGTATTTCTGCTAAAAATGGTTTATTAATTCAAA ACAGAACTTCTCTAGAAAAAATAAATACAATTAAATATGCCTTAATGGATAAAACGGGAACATTAACTGACGGTAAGTTT ATTGTTCGTAATGTTATTGATTTTACTGATGAAACAGACACTCTCCAAATCATGGCAGCACTTGAAGGAAGTTCCACTCA CCCGATTGCTCAATCAATCGTTGCAGCTGCTAAACCTCTTGAAAATCTAAAAGTTGAAGCGGTTGAAAATATTCCAGGAG TTGGGATTAAAGGGCAAGTTAATCAAAACTTTTATCAAATTGTTAACTATAAATATCTTCGTGAAAATCAACTTTCTTAT GATGAACAAAAGATTGCTCAATATTTAGATTTAGGTTTAACTGTATCTTTCCTAATCAATGAACAACAAGATGTTTTAGG ATTTATTGCCTTAGGAGATTCTCCTAAAGCAGACGCGAAAGCCTTTATTAATGGTTTATTAGCCCAAGGAATTACCCCTG TTATGCTCACGGGTGATAATAAAGAAACTGCTAAAAAAATTGCTAGTGCACTAAATATTCCCGAATTTAGAGCGGAATTA AAACCTGAAGATAAAGCAGAAATTGTGAAAGAGTACCAAAAGAAAGCCGGCGTGCTTTTCATTGGTGATGGTGTCAATGA TTCCCCAGCTCTTGCAACTGCTACGATTGGTTTTGCGATTGGAGCAGGAACTTCGGTTGCTATCAGTACCGCTGATGTCG TCCTAGTTAACTCCAATCCAAGTGACGTCTTGGATATGATTAATATCTCCAAACGCATGCTTAGAAAAATGAAACAAAAC CTCTGGTTTGGAGCAGGCTATAACATTATTGCTATTCCTGTTGCAGCGGGTATTCTTTATCCATTTACAGGAATTTATAT TGACCCTCTCATTGCAGCAGTCCTGATGTCAATCTCAACCGTGATTGTATCAATCAACGCGATGGGATTGAGGTATGATA AAAAATAG Protein sequence : MSNKTHSSNHDEMMSEHHHNHEIMDMEHENHEMHNMHNMDNMHDMDNMDMMNHGGHMMHMGDMSKKLKVAIILMIPLLLI SPIAGFTILKFPGSEILQLILGTIIFFYSGTPFFSGAKGELKSRKPAMMMLITMGITVAYAYSVYATIMSLNGHMGMNFW FELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKSGKDVELSELKVGDLLLVKENEKIPADGLILSEALVDE SMITGESRAVNKKTNDLVYGGSLNQNQPFEMKVTTLGKDSFLNQVAELVKKAQAQKSNLENMADRVAGYLFYAALIVGIF SLIFWTISSNFSFALLLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEKINTIKYALMDKTGTLTDGKF IVRNVIDFTDETDTLQIMAALEGSSTHPIAQSIVAAAKPLENLKVEAVENIPGVGIKGQVNQNFYQIVNYKYLRENQLSY DEQKIAQYLDLGLTVSFLINEQQDVLGFIALGDSPKADAKAFINGLLAQGITPVMLTGDNKETAKKIASALNIPEFRAEL KPEDKAEIVKEYQKKAGVLFIGDGVNDSPALATATIGFAIGAGTSVAISTADVVLVNSNPSDVLDMINISKRMLRKMKQN LWFGAGYNIIAIPVAAGILYPFTGIYIDPLIAAVLMSISTVIVSINAMGLRYDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-100 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_005868203.1 | copper-translocating P-type ATPase | BAC0079 | Protein | 1e-119 | 48 |
| copB | YP_005868203.1 | copper-translocating P-type ATPase | BAC0629 | Protein | 5e-108 | 46 |
| copB | YP_005868203.1 | copper-translocating P-type ATPase | BAC0383 | Protein | 2e-109 | 46 |
