Gene Information

Name : ygfA (CVCAS_0555)
Accession : YP_005867951.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 567562 - 568233 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :

ATGAAAACAATTCTTAAAATGGAAAATGTAAAAAAATCTTTTGGTAGTGGTCATAATGAGATTCAGGCACTCAAAGGAAT
CGATTTAGCAGTCAATCAAGGAGAATTTGTTTCAATTATTGGTCCCTCCGGTTCAGGCAAAAGTACATTTCTCACAATTG
CAGGTGGTTTACAAAGTCCAACTTCTGGGAACATTTCAATCAATGGCTTAGATTTTACACCATTGTCAGAAAAAAAACGT
TCTAAACTTAGATTTAAAGAAATAGGTTTCATCCTCCAAAGTTCTAATTTGACTCCTTATTTGACTATTGAAGAACAATT
TCTCCTTATTGATAAAATCAATCACGAAAAACTAACTTCTAAAAAAGGGATTGAACTTCTTAAATCACTTGATATTTTAG
ACTTAAAAGATAAACATCCTAGTGATCTTTCTGGTGGTGAAAGACAAAGGGCAGCTATTGCTCGTGCTCTCTTTAATGAA
CCAAATTTAATTTTGGCGGATGAACCAACAGCAAGTTTAGACACTGAGCATGCTTATCAGGTTGTTGAATTATTAAGACA
AGAAGCTCATTTGAAGAATAAAGCAACAATCATGGTCACTCATGACCAAAGAATGATTAAAAATAGTGACAGTATTTATA
AGATTGAAGATGGACTCTTATCAAAAATCTAA

Protein sequence :

MKTILKMENVKKSFGSGHNEIQALKGIDLAVNQGEFVSIIGPSGSGKSTFLTIAGGLQSPTSGNISINGLDFTPLSEKKR
SKLRFKEIGFILQSSNLTPYLTIEEQFLLIDKINHEKLTSKKGIELLKSLDILDLKDKHPSDLSGGERQRAAIARALFNE
PNLILADEPTASLDTEHAYQVVELLRQEAHLKNKATIMVTHDQRMIKNSDSIYKIEDGLLSKI

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	7e-47	49
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	4e-40	47

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ygfA	YP_005867951.1	ABC transporter ATP-binding protein	NC_012469.1.7686878.	Protein	2e-29	43